Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
IRX4P78413 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.59■□□□□ 0.25
IRX4P78413 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.59■□□□□ 0.25
IRX4P78413 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
IRX4P78413 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.59■□□□□ 0.25
IRX4P78413 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IRX4P78413 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.59■□□□□ 0.25
IRX4P78413 AL139011.1-202ENST00000642063 584 ntBASIC16.59■□□□□ 0.25
IRX4P78413 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.59■□□□□ 0.25
IRX4P78413 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 AC099063.4-201ENST00000641099 1602 ntBASIC16.59■□□□□ 0.25
IRX4P78413 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IRX4P78413 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
IRX4P78413 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.59■□□□□ 0.25
IRX4P78413 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
IRX4P78413 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 AL031731.1-201ENST00000642131 2094 ntBASIC16.58■□□□□ 0.25
IRX4P78413 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 AC104640.1-201ENST00000562617 2109 ntBASIC16.58■□□□□ 0.25
IRX4P78413 AL603832.2-201ENST00000566195 2125 ntBASIC16.58■□□□□ 0.25
IRX4P78413 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.58■□□□□ 0.25
IRX4P78413 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
IRX4P78413 AC092850.2-201ENST00000623821 2697 ntBASIC16.58■□□□□ 0.25
IRX4P78413 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
IRX4P78413 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
IRX4P78413 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
IRX4P78413 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
IRX4P78413 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
IRX4P78413 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.58■□□□□ 0.24
IRX4P78413 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.58■□□□□ 0.24
IRX4P78413 KRT17P7-201ENST00000451704 1104 ntBASIC16.58■□□□□ 0.24
IRX4P78413 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.58■□□□□ 0.24
IRX4P78413 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.58■□□□□ 0.24
IRX4P78413 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.58■□□□□ 0.24
IRX4P78413 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
IRX4P78413 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.58■□□□□ 0.24
IRX4P78413 AC022144.1-201ENST00000602255 1580 ntBASIC16.58■□□□□ 0.24
IRX4P78413 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.58■□□□□ 0.24
IRX4P78413 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 GGT4P-201ENST00000623672 1708 ntBASIC16.58■□□□□ 0.24
IRX4P78413 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.58■□□□□ 0.24
IRX4P78413 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
IRX4P78413 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.58■□□□□ 0.24
IRX4P78413 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.58■□□□□ 0.24
IRX4P78413 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.58■□□□□ 0.24
IRX4P78413 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
IRX4P78413 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
IRX4P78413 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
IRX4P78413 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
IRX4P78413 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
IRX4P78413 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
IRX4P78413 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.57■□□□□ 0.24
IRX4P78413 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.57■□□□□ 0.24
IRX4P78413 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IRX4P78413 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.57■□□□□ 0.24
IRX4P78413 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms