Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH12P55289 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH12P55289 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH12P55289 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH12P55289 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH12P55289 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDH12P55289 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH12P55289 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDH12P55289 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.84□□□□□ -0.03
CDH12P55289 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.84□□□□□ -0.03
CDH12P55289 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.84□□□□□ -0.03
CDH12P55289 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDH12P55289 AP002472.1-201ENST00000577490 586 ntBASIC14.84□□□□□ -0.03
CDH12P55289 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH12P55289 MIR4321-201ENST00000592276 80 ntBASIC14.84□□□□□ -0.03
CDH12P55289 AL121894.2-201ENST00000602977 491 ntBASIC14.84□□□□□ -0.03
CDH12P55289 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.84□□□□□ -0.03
CDH12P55289 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.84□□□□□ -0.03
CDH12P55289 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDH12P55289 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.84□□□□□ -0.03
CDH12P55289 OR2I1P-209ENST00000641730 5365 ntBASIC14.84□□□□□ -0.03
CDH12P55289 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 ZNF259P1-201ENST00000407656 1365 ntBASIC14.84□□□□□ -0.03
CDH12P55289 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.84□□□□□ -0.03
CDH12P55289 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH12P55289 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.83□□□□□ -0.03
CDH12P55289 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDH12P55289 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CDH12P55289 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.83□□□□□ -0.03
CDH12P55289 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDH12P55289 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CDH12P55289 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.83□□□□□ -0.03
CDH12P55289 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CDH12P55289 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDH12P55289 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.83□□□□□ -0.03
CDH12P55289 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.83□□□□□ -0.03
CDH12P55289 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CDH12P55289 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH12P55289 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 AC091951.1-201ENST00000512854 2465 ntBASIC14.83□□□□□ -0.04
CDH12P55289 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH12P55289 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH12P55289 PRYP6-201ENST00000514804 343 ntBASIC14.83□□□□□ -0.04
CDH12P55289 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 AC002347.1-201ENST00000569543 541 ntBASIC14.83□□□□□ -0.04
CDH12P55289 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.83□□□□□ -0.04
CDH12P55289 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 CICP24-201ENST00000605464 2705 ntBASIC14.83□□□□□ -0.04
CDH12P55289 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
CDH12P55289 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.83□□□□□ -0.04
CDH12P55289 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDH12P55289 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms