Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH8P55286 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDH8P55286 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH8P55286 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH8P55286 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH8P55286 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH8P55286 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH8P55286 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH8P55286 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH8P55286 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDH8P55286 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDH8P55286 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 AC009090.5-201ENST00000624886 2285 ntBASIC16.88■□□□□ 0.29
CDH8P55286 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH8P55286 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 SPDYE19P-201ENST00000338590 713 ntBASIC16.88■□□□□ 0.29
CDH8P55286 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH8P55286 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CDH8P55286 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH8P55286 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH8P55286 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH8P55286 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.88■□□□□ 0.29
CDH8P55286 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDH8P55286 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH8P55286 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH8P55286 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH8P55286 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH8P55286 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.87■□□□□ 0.29
CDH8P55286 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH8P55286 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH8P55286 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH8P55286 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH8P55286 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH8P55286 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH8P55286 DOC2GP-202ENST00000514950 1163 ntBASIC16.87■□□□□ 0.29
CDH8P55286 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
CDH8P55286 TIMM17BP1-201ENST00000545713 516 ntBASIC16.87■□□□□ 0.29
CDH8P55286 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CDH8P55286 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH8P55286 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDH8P55286 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH8P55286 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH8P55286 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH8P55286 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH8P55286 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH8P55286 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH8P55286 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CDH8P55286 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDH8P55286 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH8P55286 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH8P55286 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDH8P55286 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH8P55286 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH8P55286 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH8P55286 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH8P55286 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH8P55286 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH8P55286 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH8P55286 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.86■□□□□ 0.29
CDH8P55286 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH8P55286 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms