Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.66■□□□□ 0.1
CDKN2DP55273 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDKN2DP55273 AC091951.1-201ENST00000512854 2465 ntBASIC15.66■□□□□ 0.1
CDKN2DP55273 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDKN2DP55273 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.66■□□□□ 0.1
CDKN2DP55273 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
CDKN2DP55273 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2DP55273 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2DP55273 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2DP55273 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.65■□□□□ 0.1
CDKN2DP55273 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.65■□□□□ 0.1
CDKN2DP55273 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKN2DP55273 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKN2DP55273 MTND6P24-201ENST00000440466 518 ntBASIC15.65■□□□□ 0.1
CDKN2DP55273 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKN2DP55273 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.65■□□□□ 0.1
CDKN2DP55273 AC027612.4-201ENST00000605371 583 ntBASIC15.65■□□□□ 0.1
CDKN2DP55273 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2DP55273 MIR6080-201ENST00000617359 66 ntBASIC15.65■□□□□ 0.1
CDKN2DP55273 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2DP55273 AC134684.3-201ENST00000641758 218 ntBASIC15.65■□□□□ 0.1
CDKN2DP55273 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDKN2DP55273 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDKN2DP55273 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
CDKN2DP55273 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2DP55273 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.65■□□□□ 0.1
CDKN2DP55273 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDKN2DP55273 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CDKN2DP55273 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
CDKN2DP55273 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKN2DP55273 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CDKN2DP55273 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDKN2DP55273 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDKN2DP55273 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKN2DP55273 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 AC254562.1-201ENST00000417586 456 ntBASIC15.64■□□□□ 0.09
CDKN2DP55273 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKN2DP55273 CNN2P11-201ENST00000429351 262 ntBASIC15.64■□□□□ 0.09
CDKN2DP55273 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKN2DP55273 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.64■□□□□ 0.09
CDKN2DP55273 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.64■□□□□ 0.09
CDKN2DP55273 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDKN2DP55273 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.64■□□□□ 0.09
CDKN2DP55273 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 AP001059.3-201ENST00000619053 235 ntBASIC15.64■□□□□ 0.09
CDKN2DP55273 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKN2DP55273 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKN2DP55273 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.64■□□□□ 0.09
CDKN2DP55273 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDKN2DP55273 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDKN2DP55273 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CDKN2DP55273 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2DP55273 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2DP55273 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDKN2DP55273 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms