Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRPF1P55201 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRPF1P55201 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRPF1P55201 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRPF1P55201 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.13■□□□□ 0.81
BRPF1P55201 PAUPAR-201ENST00000630360 2965 ntBASIC20.13■□□□□ 0.81
BRPF1P55201 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BRPF1P55201 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
BRPF1P55201 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.12■□□□□ 0.81
BRPF1P55201 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
BRPF1P55201 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.12■□□□□ 0.81
BRPF1P55201 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.12■□□□□ 0.81
BRPF1P55201 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC20.12■□□□□ 0.81
BRPF1P55201 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
BRPF1P55201 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.12■□□□□ 0.81
BRPF1P55201 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
BRPF1P55201 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.12■□□□□ 0.81
BRPF1P55201 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.12■□□□□ 0.81
BRPF1P55201 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
BRPF1P55201 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
BRPF1P55201 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.12■□□□□ 0.81
BRPF1P55201 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.12■□□□□ 0.81
BRPF1P55201 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 AC092384.3-202ENST00000564646 2873 ntBASIC20.12■□□□□ 0.81
BRPF1P55201 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
BRPF1P55201 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BRPF1P55201 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.11■□□□□ 0.81
BRPF1P55201 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.11■□□□□ 0.81
BRPF1P55201 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
BRPF1P55201 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.11■□□□□ 0.81
BRPF1P55201 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.11■□□□□ 0.81
BRPF1P55201 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.11■□□□□ 0.81
BRPF1P55201 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.11■□□□□ 0.81
BRPF1P55201 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.11■□□□□ 0.81
BRPF1P55201 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.11■□□□□ 0.81
BRPF1P55201 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
BRPF1P55201 AC008738.7-201ENST00000609744 511 ntBASIC20.11■□□□□ 0.81
BRPF1P55201 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.11■□□□□ 0.81
BRPF1P55201 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.11■□□□□ 0.81
BRPF1P55201 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.11■□□□□ 0.81
BRPF1P55201 AL162727.3-201ENST00000635661 2787 ntBASIC20.11■□□□□ 0.81
BRPF1P55201 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BRPF1P55201 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.1■□□□□ 0.81
BRPF1P55201 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.1■□□□□ 0.81
BRPF1P55201 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BRPF1P55201 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 AC022144.1-201ENST00000602255 1580 ntBASIC20.1■□□□□ 0.81
BRPF1P55201 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
BRPF1P55201 PRAL-201ENST00000624952 3286 ntBASIC20.1■□□□□ 0.81
BRPF1P55201 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
BRPF1P55201 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.1■□□□□ 0.81
BRPF1P55201 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.1■□□□□ 0.81
BRPF1P55201 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.1■□□□□ 0.81
BRPF1P55201 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.1■□□□□ 0.81
BRPF1P55201 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.1■□□□□ 0.81
BRPF1P55201 HILS1-202ENST00000545329 423 ntBASIC20.1■□□□□ 0.81
BRPF1P55201 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.1■□□□□ 0.81
BRPF1P55201 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.1■□□□□ 0.81
BRPF1P55201 AC004233.3-201ENST00000607794 1269 ntBASIC20.1■□□□□ 0.81
BRPF1P55201 AC004461.2-201ENST00000629517 803 ntBASIC20.1■□□□□ 0.81
BRPF1P55201 AC004840.1-201ENST00000636359 365 ntBASIC20.1■□□□□ 0.81
BRPF1P55201 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 CROCCP1-201ENST00000426910 5675 ntBASIC20.1■□□□□ 0.81
BRPF1P55201 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.1■□□□□ 0.81
BRPF1P55201 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
BRPF1P55201 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRPF1P55201 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms