Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDX1P52945 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.4■□□□□ 0.06
PDX1P52945 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PDX1P52945 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 FO393414.2-201ENST00000405153 598 ntBASIC15.39■□□□□ 0.05
PDX1P52945 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.39■□□□□ 0.05
PDX1P52945 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 AC007389.4-201ENST00000454674 793 ntBASIC15.39■□□□□ 0.05
PDX1P52945 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.39■□□□□ 0.05
PDX1P52945 RARRES2P5-201ENST00000564013 466 ntBASIC15.39■□□□□ 0.05
PDX1P52945 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 AL033527.4-201ENST00000641026 673 ntBASIC15.39■□□□□ 0.05
PDX1P52945 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.39■□□□□ 0.05
PDX1P52945 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.39■□□□□ 0.05
PDX1P52945 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.39■□□□□ 0.05
PDX1P52945 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PDX1P52945 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PDX1P52945 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.38■□□□□ 0.05
PDX1P52945 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.38■□□□□ 0.05
PDX1P52945 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.38■□□□□ 0.05
PDX1P52945 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.38■□□□□ 0.05
PDX1P52945 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.38■□□□□ 0.05
PDX1P52945 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.38■□□□□ 0.05
PDX1P52945 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.38■□□□□ 0.05
PDX1P52945 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.38■□□□□ 0.05
PDX1P52945 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PDX1P52945 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.38■□□□□ 0.05
PDX1P52945 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PDX1P52945 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.38■□□□□ 0.05
PDX1P52945 Z97205.2-201ENST00000564697 1639 ntBASIC15.38■□□□□ 0.05
PDX1P52945 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDX1P52945 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms