Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC010328.2-201ENST00000597698 1111 ntBASIC16.58■□□□□ 0.24
CLCN4P51793 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN4P51793 AC244093.1-201ENST00000610837 814 ntBASIC16.58■□□□□ 0.24
CLCN4P51793 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.58■□□□□ 0.24
CLCN4P51793 RHOXF1P1-202ENST00000635473 501 ntBASIC16.58■□□□□ 0.24
CLCN4P51793 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.58■□□□□ 0.24
CLCN4P51793 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLCN4P51793 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CLCN4P51793 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLCN4P51793 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.57■□□□□ 0.24
CLCN4P51793 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCN4P51793 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CLCN4P51793 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLCN4P51793 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.57■□□□□ 0.24
CLCN4P51793 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 ACKR1-201ENST00000368121 1240 ntBASIC16.57■□□□□ 0.24
CLCN4P51793 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN4P51793 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN4P51793 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 PFN1P12-201ENST00000455938 534 ntBASIC16.57■□□□□ 0.24
CLCN4P51793 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 AC022137.2-201ENST00000503482 481 ntBASIC16.57■□□□□ 0.24
CLCN4P51793 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCN4P51793 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 AC084346.2-201ENST00000607097 949 ntBASIC16.57■□□□□ 0.24
CLCN4P51793 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.57■□□□□ 0.24
CLCN4P51793 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.57■□□□□ 0.24
CLCN4P51793 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN4P51793 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLCN4P51793 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 PCDHB19P-201ENST00000570871 2371 ntBASIC16.57■□□□□ 0.24
CLCN4P51793 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLCN4P51793 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN4P51793 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.56■□□□□ 0.24
CLCN4P51793 DRD5P1-201ENST00000456605 1438 ntBASIC16.56■□□□□ 0.24
CLCN4P51793 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLCN4P51793 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN4P51793 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 BCYRN1-201ENST00000418539 200 ntBASIC16.56■□□□□ 0.24
CLCN4P51793 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCN4P51793 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CLCN4P51793 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCN4P51793 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN4P51793 DUX4L45-201ENST00000566406 1057 ntBASIC16.56■□□□□ 0.24
CLCN4P51793 AC009542.2-202ENST00000619004 1067 ntBASIC16.56■□□□□ 0.24
CLCN4P51793 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
CLCN4P51793 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN4P51793 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN4P51793 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN4P51793 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN4P51793 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN4P51793 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CLCN4P51793 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN4P51793 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN4P51793 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms