Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.3□□□□□ -0.12
ATRXP46100 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.3□□□□□ -0.12
ATRXP46100 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
ATRXP46100 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ATRXP46100 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.3□□□□□ -0.12
ATRXP46100 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.3□□□□□ -0.12
ATRXP46100 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.3□□□□□ -0.12
ATRXP46100 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.3□□□□□ -0.12
ATRXP46100 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.3□□□□□ -0.12
ATRXP46100 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATRXP46100 COX20P1-201ENST00000366529 357 ntBASIC14.3□□□□□ -0.12
ATRXP46100 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.3□□□□□ -0.12
ATRXP46100 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.3□□□□□ -0.12
ATRXP46100 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.3□□□□□ -0.12
ATRXP46100 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.3□□□□□ -0.12
ATRXP46100 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
ATRXP46100 AC022966.2-201ENST00000587434 367 ntBASIC14.3□□□□□ -0.12
ATRXP46100 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ATRXP46100 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ATRXP46100 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.29□□□□□ -0.12
ATRXP46100 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ATRXP46100 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.29□□□□□ -0.12
ATRXP46100 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 TUBB8P8-201ENST00000458717 1058 ntBASIC14.29□□□□□ -0.12
ATRXP46100 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.29□□□□□ -0.12
ATRXP46100 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.29□□□□□ -0.12
ATRXP46100 AC138894.2-201ENST00000602838 371 ntBASIC14.29□□□□□ -0.12
ATRXP46100 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.29□□□□□ -0.12
ATRXP46100 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.29□□□□□ -0.12
ATRXP46100 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.29□□□□□ -0.12
ATRXP46100 ENPP7P8-202ENST00000527856 1345 ntBASIC14.29□□□□□ -0.12
ATRXP46100 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATRXP46100 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.29□□□□□ -0.12
ATRXP46100 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.29□□□□□ -0.12
ATRXP46100 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.29□□□□□ -0.12
ATRXP46100 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.29□□□□□ -0.12
ATRXP46100 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
ATRXP46100 AC026410.1-201ENST00000507366 1101 ntBASIC14.29□□□□□ -0.12
ATRXP46100 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.29□□□□□ -0.12
ATRXP46100 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.29□□□□□ -0.12
ATRXP46100 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.29□□□□□ -0.12
ATRXP46100 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
ATRXP46100 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 BNIP3P1-202ENST00000550043 1585 ntBASIC14.28□□□□□ -0.12
ATRXP46100 AL133373.2-201ENST00000623187 2828 ntBASIC14.28□□□□□ -0.12
ATRXP46100 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATRXP46100 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.28□□□□□ -0.12
ATRXP46100 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ATRXP46100 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.28□□□□□ -0.12
ATRXP46100 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATRXP46100 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms