Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
RFC3P40938 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.57□□□□□ -0.08
RFC3P40938 AL691432.1-201ENST00000596308 1422 ntBASIC14.57□□□□□ -0.08
RFC3P40938 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.57□□□□□ -0.08
RFC3P40938 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFC3P40938 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.56□□□□□ -0.08
RFC3P40938 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
RFC3P40938 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFC3P40938 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 AC026691.1-201ENST00000602502 2017 ntBASIC14.56□□□□□ -0.08
RFC3P40938 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 AC099063.4-201ENST00000641099 1602 ntBASIC14.56□□□□□ -0.08
RFC3P40938 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RFC3P40938 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RFC3P40938 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RFC3P40938 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 NME2P1-201ENST00000426182 414 ntBASIC14.56□□□□□ -0.08
RFC3P40938 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.56□□□□□ -0.08
RFC3P40938 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.56□□□□□ -0.08
RFC3P40938 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.56□□□□□ -0.08
RFC3P40938 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
RFC3P40938 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.56□□□□□ -0.08
RFC3P40938 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.56□□□□□ -0.08
RFC3P40938 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.56□□□□□ -0.08
RFC3P40938 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.56□□□□□ -0.08
RFC3P40938 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.56□□□□□ -0.08
RFC3P40938 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.56□□□□□ -0.08
RFC3P40938 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFC3P40938 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.56□□□□□ -0.08
RFC3P40938 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFC3P40938 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 C8orf49-201ENST00000525043 1968 ntBASIC14.56□□□□□ -0.08
RFC3P40938 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RFC3P40938 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 AC138969.3-201ENST00000546612 1459 ntBASIC14.56□□□□□ -0.08
RFC3P40938 AC138932.2-201ENST00000548268 1459 ntBASIC14.56□□□□□ -0.08
RFC3P40938 AC126755.4-201ENST00000549796 1459 ntBASIC14.56□□□□□ -0.08
RFC3P40938 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.56□□□□□ -0.08
RFC3P40938 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFC3P40938 FLJ16779-201ENST00000612722 7638 ntBASIC14.56□□□□□ -0.08
RFC3P40938 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.55□□□□□ -0.08
RFC3P40938 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.55□□□□□ -0.08
RFC3P40938 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RFC3P40938 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RFC3P40938 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 AC134407.2-201ENST00000625089 1978 ntBASIC14.55□□□□□ -0.08
RFC3P40938 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.55□□□□□ -0.08
RFC3P40938 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 AZGP1P1-201ENST00000411909 902 ntBASIC14.55□□□□□ -0.08
RFC3P40938 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.55□□□□□ -0.08
RFC3P40938 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFC3P40938 KRT17P7-201ENST00000451704 1104 ntBASIC14.55□□□□□ -0.08
RFC3P40938 AC093004.1-201ENST00000508850 424 ntBASIC14.55□□□□□ -0.08
RFC3P40938 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.55□□□□□ -0.08
RFC3P40938 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms