Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCLP35914 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCLP35914 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCLP35914 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.75■□□□□ 0.11
HMGCLP35914 TOMM22P5-201ENST00000416399 439 ntBASIC15.75■□□□□ 0.11
HMGCLP35914 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.75■□□□□ 0.11
HMGCLP35914 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCLP35914 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.75■□□□□ 0.11
HMGCLP35914 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGCLP35914 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 LINC01115-203ENST00000606068 577 ntBASIC15.75■□□□□ 0.11
HMGCLP35914 AL355385.1-201ENST00000606123 409 ntBASIC15.75■□□□□ 0.11
HMGCLP35914 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 AC004840.1-201ENST00000636359 365 ntBASIC15.75■□□□□ 0.11
HMGCLP35914 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HMGCLP35914 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGCLP35914 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGCLP35914 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGCLP35914 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
HMGCLP35914 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HMGCLP35914 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.74■□□□□ 0.11
HMGCLP35914 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.74■□□□□ 0.11
HMGCLP35914 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 AJ011932.1-201ENST00000621707 465 ntBASIC15.74■□□□□ 0.11
HMGCLP35914 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGCLP35914 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 AC090616.6-203ENST00000579186 1945 ntBASIC15.74■□□□□ 0.11
HMGCLP35914 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGCLP35914 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
HMGCLP35914 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGCLP35914 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HMGCLP35914 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCLP35914 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HMGCLP35914 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HMGCLP35914 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HMGCLP35914 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.73■□□□□ 0.11
HMGCLP35914 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGCLP35914 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms