Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
USP6P35125 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.03■□□□□ 0.96
USP6P35125 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
USP6P35125 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC21.03■□□□□ 0.96
USP6P35125 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC21.03■□□□□ 0.96
USP6P35125 ENPP7P14-201ENST00000621765 1040 ntBASIC21.03■□□□□ 0.96
USP6P35125 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
USP6P35125 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP6P35125 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
USP6P35125 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.03■□□□□ 0.96
USP6P35125 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.02■□□□□ 0.96
USP6P35125 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 AC084364.1-201ENST00000551967 1556 ntBASIC21.02■□□□□ 0.96
USP6P35125 AC007787.1-201ENST00000588095 1583 ntBASIC21.02■□□□□ 0.96
USP6P35125 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
USP6P35125 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC21.02■□□□□ 0.96
USP6P35125 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 AL158070.2-201ENST00000623713 1621 ntBASIC21.02■□□□□ 0.96
USP6P35125 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC21.02■□□□□ 0.96
USP6P35125 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP6P35125 IGHJ2P-201ENST00000454480 60 ntBASIC21.02■□□□□ 0.96
USP6P35125 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.02■□□□□ 0.96
USP6P35125 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
USP6P35125 ACTG1P17-201ENST00000558391 1119 ntBASIC21.02■□□□□ 0.96
USP6P35125 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC21.02■□□□□ 0.96
USP6P35125 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.02■□□□□ 0.95
USP6P35125 AC112504.1-201ENST00000623415 1841 ntBASIC21.02■□□□□ 0.95
USP6P35125 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.02■□□□□ 0.95
USP6P35125 AL662844.4-201ENST00000606367 2838 ntBASIC21.01■□□□□ 0.95
USP6P35125 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP6P35125 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
USP6P35125 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
USP6P35125 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC21.01■□□□□ 0.95
USP6P35125 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC21.01■□□□□ 0.95
USP6P35125 SCARNA20.5-201ENST00000516991 142 ntBASIC21.01■□□□□ 0.95
USP6P35125 RHOQP1-201ENST00000555758 579 ntBASIC21.01■□□□□ 0.95
USP6P35125 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.01■□□□□ 0.95
USP6P35125 AL645728.2-202ENST00000641679 227 ntBASIC21.01■□□□□ 0.95
USP6P35125 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC21.01■□□□□ 0.95
USP6P35125 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP6P35125 PCDHA14-201ENST00000506751 2298 ntBASIC21.01■□□□□ 0.95
USP6P35125 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC21.01■□□□□ 0.95
USP6P35125 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
USP6P35125 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21■□□□□ 0.95
USP6P35125 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 SNX21-203ENST00000372541 771 ntTSL 2 BASIC21■□□□□ 0.95
USP6P35125 AL645937.2-201ENST00000396808 931 ntBASIC21■□□□□ 0.95
USP6P35125 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC21■□□□□ 0.95
USP6P35125 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC21■□□□□ 0.95
USP6P35125 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC21■□□□□ 0.95
USP6P35125 PPA1-206ENST00000625364 644 ntTSL 5 BASIC21■□□□□ 0.95
USP6P35125 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC21■□□□□ 0.95
USP6P35125 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC21■□□□□ 0.95
USP6P35125 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
USP6P35125 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
USP6P35125 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
USP6P35125 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
USP6P35125 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP6P35125 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP6P35125 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms