Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC8P31273 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC8P31273 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC8P31273 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC8P31273 KRT8P13-201ENST00000463294 1010 ntBASIC17.03■□□□□ 0.32
HOXC8P31273 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.03■□□□□ 0.32
HOXC8P31273 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HOXC8P31273 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC8P31273 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC8P31273 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC8P31273 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC8P31273 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXC8P31273 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC8P31273 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HOXC8P31273 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC8P31273 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HOXC8P31273 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC8P31273 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC8P31273 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 AC007787.1-201ENST00000588095 1583 ntBASIC17.02■□□□□ 0.32
HOXC8P31273 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HOXC8P31273 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 MIR1202-201ENST00000408529 83 ntBASIC17.02■□□□□ 0.32
HOXC8P31273 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC8P31273 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXC8P31273 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.02■□□□□ 0.32
HOXC8P31273 AC243960.2-201ENST00000600996 747 ntBASIC17.02■□□□□ 0.32
HOXC8P31273 ECM1P1-201ENST00000604092 1279 ntBASIC17.02■□□□□ 0.32
HOXC8P31273 AC005695.3-201ENST00000614522 232 ntBASIC17.02■□□□□ 0.32
HOXC8P31273 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC8P31273 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.02■□□□□ 0.32
HOXC8P31273 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC8P31273 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC8P31273 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC8P31273 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC8P31273 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HOXC8P31273 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC8P31273 AC084364.1-201ENST00000551967 1556 ntBASIC17.02■□□□□ 0.31
HOXC8P31273 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC8P31273 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC8P31273 AL603832.2-201ENST00000566195 2125 ntBASIC17.02■□□□□ 0.31
HOXC8P31273 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HOXC8P31273 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
HOXC8P31273 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.02■□□□□ 0.31
HOXC8P31273 AL662844.4-201ENST00000606367 2838 ntBASIC17.02■□□□□ 0.31
HOXC8P31273 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC8P31273 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC8P31273 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC8P31273 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HOXC8P31273 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HOXC8P31273 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HOXC8P31273 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXC8P31273 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXC8P31273 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 BCYRN1-201ENST00000418539 200 ntBASIC17.01■□□□□ 0.31
HOXC8P31273 AC007969.1-201ENST00000433675 447 ntBASIC17.01■□□□□ 0.31
HOXC8P31273 RPSAP36-202ENST00000494591 1261 ntBASIC17.01■□□□□ 0.31
HOXC8P31273 EEF1DP1-201ENST00000585891 896 ntBASIC17.01■□□□□ 0.31
HOXC8P31273 KRT8P14-201ENST00000414254 1442 ntBASIC17.01■□□□□ 0.31
HOXC8P31273 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
HOXC8P31273 AC006449.5-201ENST00000610658 2098 ntBASIC17.01■□□□□ 0.31
HOXC8P31273 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXC8P31273 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
HOXC8P31273 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC8P31273 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HOXC8P31273 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC8P31273 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
HOXC8P31273 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC8P31273 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC8P31273 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC8P31273 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC8P31273 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17■□□□□ 0.31
HOXC8P31273 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms