Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 PMS2P2-201ENST00000425039 1128 ntBASIC14.59□□□□□ -0.07
SHC1P29353 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.59□□□□□ -0.07
SHC1P29353 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.59□□□□□ -0.07
SHC1P29353 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.59□□□□□ -0.07
SHC1P29353 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.59□□□□□ -0.07
SHC1P29353 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.59□□□□□ -0.07
SHC1P29353 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.59□□□□□ -0.07
SHC1P29353 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.59□□□□□ -0.07
SHC1P29353 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SHC1P29353 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.59□□□□□ -0.07
SHC1P29353 AC024267.1-201ENST00000582320 895 ntBASIC14.59□□□□□ -0.07
SHC1P29353 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.59□□□□□ -0.07
SHC1P29353 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.59□□□□□ -0.07
SHC1P29353 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.59□□□□□ -0.07
SHC1P29353 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.59□□□□□ -0.07
SHC1P29353 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.59□□□□□ -0.07
SHC1P29353 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.59□□□□□ -0.07
SHC1P29353 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SHC1P29353 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.59□□□□□ -0.07
SHC1P29353 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SHC1P29353 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SHC1P29353 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
SHC1P29353 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
SHC1P29353 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.58□□□□□ -0.07
SHC1P29353 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
SHC1P29353 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SHC1P29353 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SHC1P29353 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.58□□□□□ -0.08
SHC1P29353 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.58□□□□□ -0.08
SHC1P29353 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SHC1P29353 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.58□□□□□ -0.08
SHC1P29353 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.58□□□□□ -0.08
SHC1P29353 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.58□□□□□ -0.08
SHC1P29353 AC025678.2-201ENST00000562061 970 ntBASIC14.58□□□□□ -0.08
SHC1P29353 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 AC106028.4-201ENST00000614509 607 ntBASIC14.58□□□□□ -0.08
SHC1P29353 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.58□□□□□ -0.08
SHC1P29353 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.58□□□□□ -0.08
SHC1P29353 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SHC1P29353 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.58□□□□□ -0.08
SHC1P29353 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.58□□□□□ -0.08
SHC1P29353 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.58□□□□□ -0.08
SHC1P29353 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SHC1P29353 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.57□□□□□ -0.08
SHC1P29353 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.57□□□□□ -0.08
SHC1P29353 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.57□□□□□ -0.08
SHC1P29353 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.57□□□□□ -0.08
SHC1P29353 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHC1P29353 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms