Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.48■□□□□ 0.07
EPHA3P29320 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
EPHA3P29320 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 RHOQP3-201ENST00000437982 621 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 AC140658.5-201ENST00000438532 169 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.48■□□□□ 0.07
EPHA3P29320 AC096734.2-201ENST00000562054 433 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.48■□□□□ 0.07
EPHA3P29320 AL049840.3-201ENST00000602669 611 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 AC104581.4-201ENST00000623126 3052 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 BNIP3P1-202ENST00000550043 1585 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
EPHA3P29320 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.48■□□□□ 0.07
EPHA3P29320 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 PCDHA3-202ENST00000532566 4594 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 AC126365.1-201ENST00000578585 1514 ntBASIC15.48■□□□□ 0.07
EPHA3P29320 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.48■□□□□ 0.07
EPHA3P29320 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.48■□□□□ 0.07
EPHA3P29320 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
EPHA3P29320 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.47■□□□□ 0.07
EPHA3P29320 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
EPHA3P29320 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
EPHA3P29320 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
EPHA3P29320 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.47■□□□□ 0.07
EPHA3P29320 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.47■□□□□ 0.07
EPHA3P29320 AC098831.1-202ENST00000438821 336 ntBASIC15.47■□□□□ 0.07
EPHA3P29320 AC009947.1-201ENST00000444350 727 ntBASIC15.47■□□□□ 0.07
EPHA3P29320 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.47■□□□□ 0.07
EPHA3P29320 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.47■□□□□ 0.07
EPHA3P29320 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.47■□□□□ 0.07
EPHA3P29320 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
EPHA3P29320 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
EPHA3P29320 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.47■□□□□ 0.07
EPHA3P29320 REXO1L1P-202ENST00000608646 1974 ntBASIC15.47■□□□□ 0.07
EPHA3P29320 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
EPHA3P29320 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
EPHA3P29320 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
EPHA3P29320 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
EPHA3P29320 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.47■□□□□ 0.07
EPHA3P29320 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.46■□□□□ 0.07
EPHA3P29320 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
EPHA3P29320 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.46■□□□□ 0.07
EPHA3P29320 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.46■□□□□ 0.07
EPHA3P29320 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.46■□□□□ 0.07
EPHA3P29320 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
EPHA3P29320 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
EPHA3P29320 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.46■□□□□ 0.07
EPHA3P29320 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.46■□□□□ 0.07
EPHA3P29320 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.46■□□□□ 0.07
EPHA3P29320 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
EPHA3P29320 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.46■□□□□ 0.07
EPHA3P29320 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms