Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 PRAL-201ENST00000624952 3286 ntBASIC15.68■□□□□ 0.1
VARSP26640 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.68■□□□□ 0.1
VARSP26640 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.68■□□□□ 0.1
VARSP26640 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VARSP26640 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.68■□□□□ 0.1
VARSP26640 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.68■□□□□ 0.1
VARSP26640 AC142381.1-201ENST00000426099 345 ntBASIC15.68■□□□□ 0.1
VARSP26640 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.68■□□□□ 0.1
VARSP26640 IGHV3-62-201ENST00000520057 340 ntBASIC15.68■□□□□ 0.1
VARSP26640 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 LINC01225-203ENST00000563550 1244 ntBASIC15.68■□□□□ 0.1
VARSP26640 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.68■□□□□ 0.1
VARSP26640 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.68■□□□□ 0.1
VARSP26640 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.68■□□□□ 0.1
VARSP26640 SPTSSB-204ENST00000617024 1292 ntBASIC15.68■□□□□ 0.1
VARSP26640 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 AJ011932.1-201ENST00000621707 465 ntBASIC15.68■□□□□ 0.1
VARSP26640 LINC00628-201ENST00000628516 1289 ntBASIC15.68■□□□□ 0.1
VARSP26640 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VARSP26640 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.68■□□□□ 0.1
VARSP26640 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.68■□□□□ 0.1
VARSP26640 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VARSP26640 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VARSP26640 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VARSP26640 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VARSP26640 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.68■□□□□ 0.1
VARSP26640 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
VARSP26640 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 AL592309.1-201ENST00000443127 649 ntBASIC15.67■□□□□ 0.1
VARSP26640 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 AC069335.1-201ENST00000489972 472 ntBASIC15.67■□□□□ 0.1
VARSP26640 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.67■□□□□ 0.1
VARSP26640 AP000842.3-202ENST00000569238 1080 ntBASIC15.67■□□□□ 0.1
VARSP26640 MIR4745-201ENST00000577608 62 ntBASIC15.67■□□□□ 0.1
VARSP26640 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 AC022532.1-201ENST00000624563 1728 ntBASIC15.67■□□□□ 0.1
VARSP26640 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VARSP26640 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.67■□□□□ 0.1
VARSP26640 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.67■□□□□ 0.1
VARSP26640 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms