Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.16□□□□□ -0.14
CTSSP25774 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSSP25774 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSSP25774 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CTSSP25774 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTSSP25774 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSSP25774 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTSSP25774 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 CICP6-201ENST00000457191 2729 ntBASIC14.16□□□□□ -0.14
CTSSP25774 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 AC008741.2-201ENST00000612792 3115 ntBASIC14.16□□□□□ -0.14
CTSSP25774 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CTSSP25774 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSSP25774 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSSP25774 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CTSSP25774 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 AP001282.1-201ENST00000531301 1499 ntBASIC14.15□□□□□ -0.14
CTSSP25774 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CTSSP25774 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CTSSP25774 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 AL589987.1-201ENST00000453380 819 ntBASIC14.15□□□□□ -0.14
CTSSP25774 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.15□□□□□ -0.14
CTSSP25774 AC123567.1-201ENST00000548294 1261 ntBASIC14.15□□□□□ -0.14
CTSSP25774 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSSP25774 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.15□□□□□ -0.14
CTSSP25774 AC093726.1-201ENST00000608064 963 ntBASIC14.15□□□□□ -0.14
CTSSP25774 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CTSSP25774 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.15□□□□□ -0.14
CTSSP25774 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSSP25774 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 Z97205.2-201ENST00000564697 1639 ntBASIC14.15□□□□□ -0.14
CTSSP25774 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSSP25774 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CTSSP25774 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CTSSP25774 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.15□□□□□ -0.15
CTSSP25774 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CTSSP25774 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSSP25774 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSSP25774 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CTSSP25774 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSSP25774 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
CTSSP25774 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.14□□□□□ -0.15
CTSSP25774 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSSP25774 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSSP25774 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSSP25774 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSSP25774 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CTSSP25774 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSSP25774 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSSP25774 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSSP25774 AL512384.1-201ENST00000406683 331 ntBASIC14.14□□□□□ -0.15
CTSSP25774 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSSP25774 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CTSSP25774 EEF1DP4-201ENST00000446006 880 ntBASIC14.14□□□□□ -0.15
CTSSP25774 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CTSSP25774 INE1-201ENST00000456273 945 ntBASIC14.14□□□□□ -0.15
CTSSP25774 GIMAP3P-201ENST00000495150 836 ntBASIC14.14□□□□□ -0.15
CTSSP25774 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.14□□□□□ -0.15
CTSSP25774 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.14□□□□□ -0.15
CTSSP25774 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.14□□□□□ -0.15
CTSSP25774 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CTSSP25774 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.14□□□□□ -0.15
CTSSP25774 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.14□□□□□ -0.15
CTSSP25774 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CTSSP25774 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms