Protein–RNA interactions for Protein: P25205

MCM3, DNA replication licensing factor MCM3, humanhuman

Predictions only

Length 808 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3P25205 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MCM3P25205 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MCM3P25205 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.85■□□□□ 0.29
MCM3P25205 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
MCM3P25205 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
MCM3P25205 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.85■□□□□ 0.29
MCM3P25205 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.84■□□□□ 0.29
MCM3P25205 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.84■□□□□ 0.29
MCM3P25205 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.84■□□□□ 0.29
MCM3P25205 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.84■□□□□ 0.29
MCM3P25205 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.84■□□□□ 0.29
MCM3P25205 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.84■□□□□ 0.29
MCM3P25205 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.84■□□□□ 0.29
MCM3P25205 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.84■□□□□ 0.29
MCM3P25205 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.84■□□□□ 0.29
MCM3P25205 MTDHP4-201ENST00000600287 670 ntBASIC16.84■□□□□ 0.29
MCM3P25205 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.84■□□□□ 0.29
MCM3P25205 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.84■□□□□ 0.29
MCM3P25205 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
MCM3P25205 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.84■□□□□ 0.29
MCM3P25205 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MCM3P25205 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.84■□□□□ 0.29
MCM3P25205 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.84■□□□□ 0.29
MCM3P25205 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MCM3P25205 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.84■□□□□ 0.29
MCM3P25205 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MCM3P25205 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
MCM3P25205 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
MCM3P25205 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MCM3P25205 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.83■□□□□ 0.28
MCM3P25205 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.83■□□□□ 0.28
MCM3P25205 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 MRPL3P1-201ENST00000400109 1033 ntBASIC16.83■□□□□ 0.28
MCM3P25205 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
MCM3P25205 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.83■□□□□ 0.28
MCM3P25205 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.83■□□□□ 0.28
MCM3P25205 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.83■□□□□ 0.28
MCM3P25205 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.83■□□□□ 0.28
MCM3P25205 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
MCM3P25205 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.83■□□□□ 0.28
MCM3P25205 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.83■□□□□ 0.28
MCM3P25205 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.83■□□□□ 0.28
MCM3P25205 AC005412.3-201ENST00000580309 715 ntBASIC16.83■□□□□ 0.28
MCM3P25205 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.83■□□□□ 0.28
MCM3P25205 AL589182.2-201ENST00000619332 1049 ntBASIC16.83■□□□□ 0.28
MCM3P25205 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MCM3P25205 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MCM3P25205 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MCM3P25205 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.83■□□□□ 0.28
MCM3P25205 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MCM3P25205 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.82■□□□□ 0.28
MCM3P25205 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
MCM3P25205 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.82■□□□□ 0.28
MCM3P25205 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.82■□□□□ 0.28
MCM3P25205 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MCM3P25205 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.82■□□□□ 0.28
MCM3P25205 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MCM3P25205 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms