Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
VAMP1P23763 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.48□□□□□ -0.25
VAMP1P23763 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VAMP1P23763 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VAMP1P23763 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
VAMP1P23763 AC131212.3-201ENST00000624087 4219 ntBASIC13.48□□□□□ -0.25
VAMP1P23763 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
VAMP1P23763 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
VAMP1P23763 BX005266.1-201ENST00000473402 457 ntBASIC13.48□□□□□ -0.25
VAMP1P23763 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
VAMP1P23763 AL139424.1-201ENST00000607572 797 ntBASIC13.48□□□□□ -0.25
VAMP1P23763 AC006011.2-201ENST00000621313 1158 ntBASIC13.48□□□□□ -0.25
VAMP1P23763 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.48□□□□□ -0.25
VAMP1P23763 AC112693.3-201ENST00000624819 1983 ntBASIC13.48□□□□□ -0.25
VAMP1P23763 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.48□□□□□ -0.25
VAMP1P23763 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
VAMP1P23763 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VAMP1P23763 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.48□□□□□ -0.25
VAMP1P23763 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 PI4KAP1-204ENST00000612579 1703 ntBASIC13.47□□□□□ -0.25
VAMP1P23763 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
VAMP1P23763 ARMC10P1-201ENST00000313754 855 ntBASIC13.47□□□□□ -0.25
VAMP1P23763 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.47□□□□□ -0.25
VAMP1P23763 KRT18P57-201ENST00000443599 1254 ntBASIC13.47□□□□□ -0.25
VAMP1P23763 KRT17P6-201ENST00000453795 1220 ntBASIC13.47□□□□□ -0.25
VAMP1P23763 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.47□□□□□ -0.25
VAMP1P23763 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 AL160237.2-201ENST00000556165 472 ntBASIC13.47□□□□□ -0.25
VAMP1P23763 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.47□□□□□ -0.25
VAMP1P23763 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.47□□□□□ -0.25
VAMP1P23763 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
VAMP1P23763 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 AL121672.3-201ENST00000608644 468 ntBASIC13.47□□□□□ -0.25
VAMP1P23763 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 AF228730.7-201ENST00000641842 219 ntBASIC13.47□□□□□ -0.25
VAMP1P23763 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
VAMP1P23763 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
VAMP1P23763 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 AL390755.1-201ENST00000623716 2027 ntBASIC13.47□□□□□ -0.25
VAMP1P23763 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VAMP1P23763 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms