Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.86□□□□□ -0.03
NR4A1P22736 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A1P22736 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A1P22736 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A1P22736 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A1P22736 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.86□□□□□ -0.03
NR4A1P22736 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A1P22736 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A1P22736 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A1P22736 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NR4A1P22736 ZNF259P1-201ENST00000407656 1365 ntBASIC14.85□□□□□ -0.03
NR4A1P22736 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.85□□□□□ -0.03
NR4A1P22736 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NR4A1P22736 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NR4A1P22736 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
NR4A1P22736 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.85□□□□□ -0.03
NR4A1P22736 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 AP002414.1-201ENST00000391405 1147 ntBASIC14.85□□□□□ -0.03
NR4A1P22736 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.85□□□□□ -0.03
NR4A1P22736 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 AC106730.1-201ENST00000566722 1090 ntBASIC14.85□□□□□ -0.03
NR4A1P22736 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.85□□□□□ -0.03
NR4A1P22736 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 AC008667.4-201ENST00000607370 168 ntBASIC14.85□□□□□ -0.03
NR4A1P22736 Z83851.2-201ENST00000609564 659 ntBASIC14.85□□□□□ -0.03
NR4A1P22736 AL139011.1-202ENST00000642063 584 ntBASIC14.85□□□□□ -0.03
NR4A1P22736 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.85□□□□□ -0.03
NR4A1P22736 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.85□□□□□ -0.03
NR4A1P22736 SNX33P1-201ENST00000592116 1762 ntBASIC14.85□□□□□ -0.03
NR4A1P22736 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR4A1P22736 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.85□□□□□ -0.03
NR4A1P22736 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NR4A1P22736 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR4A1P22736 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 AC104109.2-201ENST00000602919 1418 ntBASIC14.84□□□□□ -0.03
NR4A1P22736 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.84□□□□□ -0.03
NR4A1P22736 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR4A1P22736 AC005912.2-201ENST00000619492 2400 ntBASIC14.84□□□□□ -0.03
NR4A1P22736 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR4A1P22736 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.84□□□□□ -0.03
NR4A1P22736 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NR4A1P22736 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.84□□□□□ -0.03
NR4A1P22736 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.84□□□□□ -0.03
NR4A1P22736 AP000347.1-202ENST00000435868 847 ntBASIC14.84□□□□□ -0.03
NR4A1P22736 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.84□□□□□ -0.03
NR4A1P22736 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.84□□□□□ -0.03
NR4A1P22736 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.84□□□□□ -0.03
NR4A1P22736 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR4A1P22736 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
NR4A1P22736 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.84□□□□□ -0.03
NR4A1P22736 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms