Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH3P22223 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 AC241585.1-201ENST00000433527 519 ntBASIC15.63■□□□□ 0.09
CDH3P22223 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.63■□□□□ 0.09
CDH3P22223 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CDH3P22223 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 AL138828.2-201ENST00000615812 383 ntBASIC15.63■□□□□ 0.09
CDH3P22223 AJ011932.1-201ENST00000621707 465 ntBASIC15.63■□□□□ 0.09
CDH3P22223 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH3P22223 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH3P22223 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.63■□□□□ 0.09
CDH3P22223 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CDH3P22223 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.63■□□□□ 0.09
CDH3P22223 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDH3P22223 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 ALOX12P2-203ENST00000570921 1945 ntBASIC15.62■□□□□ 0.09
CDH3P22223 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH3P22223 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH3P22223 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH3P22223 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.62■□□□□ 0.09
CDH3P22223 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CDH3P22223 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.62■□□□□ 0.09
CDH3P22223 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.62■□□□□ 0.09
CDH3P22223 HLA-V-204ENST00000476601 1289 ntBASIC15.62■□□□□ 0.09
CDH3P22223 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH3P22223 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDH3P22223 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.62■□□□□ 0.09
CDH3P22223 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.62■□□□□ 0.09
CDH3P22223 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.62■□□□□ 0.09
CDH3P22223 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.62■□□□□ 0.09
CDH3P22223 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.62■□□□□ 0.09
CDH3P22223 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDH3P22223 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.62■□□□□ 0.09
CDH3P22223 AL365209.1-201ENST00000624418 6473 ntBASIC15.62■□□□□ 0.09
CDH3P22223 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH3P22223 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH3P22223 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CDH3P22223 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH3P22223 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDH3P22223 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH3P22223 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.61■□□□□ 0.09
CDH3P22223 CICP4-201ENST00000447359 2812 ntBASIC15.61■□□□□ 0.09
CDH3P22223 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH3P22223 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.61■□□□□ 0.09
CDH3P22223 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDH3P22223 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CDH3P22223 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms