Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.33■□□□□ 0.04
CAPN3P20807 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.33■□□□□ 0.04
CAPN3P20807 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CAPN3P20807 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CAPN3P20807 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CAPN3P20807 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.33■□□□□ 0.04
CAPN3P20807 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CAPN3P20807 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 ELL2P1-201ENST00000413990 1906 ntBASIC15.33■□□□□ 0.04
CAPN3P20807 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN3P20807 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CAPN3P20807 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.33■□□□□ 0.04
CAPN3P20807 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 AC023908.3-201ENST00000564211 3047 ntBASIC15.32■□□□□ 0.04
CAPN3P20807 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 VN2R19P-201ENST00000442399 1052 ntBASIC15.32■□□□□ 0.04
CAPN3P20807 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN3P20807 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.32■□□□□ 0.04
CAPN3P20807 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.32■□□□□ 0.04
CAPN3P20807 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN3P20807 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN3P20807 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 AC010507.1-201ENST00000633895 436 ntBASIC15.32■□□□□ 0.04
CAPN3P20807 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN3P20807 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.32■□□□□ 0.04
CAPN3P20807 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CAPN3P20807 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.32■□□□□ 0.04
CAPN3P20807 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.32■□□□□ 0.04
CAPN3P20807 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CAPN3P20807 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.31■□□□□ 0.04
CAPN3P20807 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 CICP23-201ENST00000605013 2741 ntBASIC15.31■□□□□ 0.04
CAPN3P20807 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CAPN3P20807 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CAPN3P20807 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CAPN3P20807 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CAPN3P20807 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms