Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB3BP20337 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAB3BP20337 AC148477.4-201ENST00000613430 1793 ntBASIC13.96□□□□□ -0.17
RAB3BP20337 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
RAB3BP20337 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RAB3BP20337 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
RAB3BP20337 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB3BP20337 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RAB3BP20337 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB3BP20337 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.96□□□□□ -0.17
RAB3BP20337 MIR4321-201ENST00000592276 80 ntBASIC13.96□□□□□ -0.17
RAB3BP20337 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 AL732292.2-201ENST00000609649 430 ntBASIC13.96□□□□□ -0.17
RAB3BP20337 NPAP1P7-201ENST00000613027 823 ntBASIC13.96□□□□□ -0.17
RAB3BP20337 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RAB3BP20337 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.96□□□□□ -0.17
RAB3BP20337 AC005912.2-201ENST00000619492 2400 ntBASIC13.96□□□□□ -0.17
RAB3BP20337 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RAB3BP20337 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RAB3BP20337 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RAB3BP20337 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.96□□□□□ -0.18
RAB3BP20337 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.96□□□□□ -0.18
RAB3BP20337 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB3BP20337 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB3BP20337 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
RAB3BP20337 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.96□□□□□ -0.18
RAB3BP20337 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RAB3BP20337 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RAB3BP20337 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RAB3BP20337 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 TMPOP1-202ENST00000424642 1267 ntBASIC13.95□□□□□ -0.18
RAB3BP20337 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.95□□□□□ -0.18
RAB3BP20337 FGFR3P6-201ENST00000457012 610 ntBASIC13.95□□□□□ -0.18
RAB3BP20337 SCARNA2-201ENST00000458748 420 ntBASIC13.95□□□□□ -0.18
RAB3BP20337 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.95□□□□□ -0.18
RAB3BP20337 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.95□□□□□ -0.18
RAB3BP20337 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RAB3BP20337 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RAB3BP20337 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.95□□□□□ -0.18
RAB3BP20337 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RAB3BP20337 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.95□□□□□ -0.18
RAB3BP20337 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RAB3BP20337 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms