Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SYN1P17600 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SYN1P17600 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 RNU1-114P-201ENST00000365297 166 ntBASIC17.03■□□□□ 0.32
SYN1P17600 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.03■□□□□ 0.32
SYN1P17600 AC011742.3-201ENST00000439053 820 ntBASIC17.03■□□□□ 0.32
SYN1P17600 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.03■□□□□ 0.32
SYN1P17600 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.03■□□□□ 0.32
SYN1P17600 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.03■□□□□ 0.32
SYN1P17600 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 PPY2P-201ENST00000582808 702 ntBASIC17.03■□□□□ 0.32
SYN1P17600 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.03■□□□□ 0.32
SYN1P17600 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 PCDHB18P-201ENST00000524813 2368 ntBASIC17.03■□□□□ 0.32
SYN1P17600 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 GGT3P-204ENST00000453783 1664 ntBASIC17.03■□□□□ 0.32
SYN1P17600 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.03■□□□□ 0.32
SYN1P17600 HLA-A-202ENST00000376806 1854 ntBASIC17.03■□□□□ 0.32
SYN1P17600 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYN1P17600 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.03■□□□□ 0.32
SYN1P17600 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SYN1P17600 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.02■□□□□ 0.32
SYN1P17600 AC134407.2-201ENST00000625089 1978 ntBASIC17.02■□□□□ 0.32
SYN1P17600 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYN1P17600 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.02■□□□□ 0.32
SYN1P17600 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYN1P17600 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SYN1P17600 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SYN1P17600 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYN1P17600 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYN1P17600 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SYN1P17600 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.02■□□□□ 0.32
SYN1P17600 AC139713.2-201ENST00000641328 2723 ntBASIC17.02■□□□□ 0.32
SYN1P17600 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
SYN1P17600 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SYN1P17600 FZD10-202ENST00000539839 3282 ntBASIC17.02■□□□□ 0.32
SYN1P17600 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYN1P17600 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYN1P17600 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYN1P17600 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.02■□□□□ 0.32
SYN1P17600 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.02■□□□□ 0.32
SYN1P17600 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.02■□□□□ 0.32
SYN1P17600 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.02■□□□□ 0.32
SYN1P17600 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.02■□□□□ 0.32
SYN1P17600 AC245100.5-201ENST00000452108 331 ntBASIC17.02■□□□□ 0.32
SYN1P17600 IGLV3-15-201ENST00000518356 244 ntBASIC17.02■□□□□ 0.32
SYN1P17600 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.02■□□□□ 0.32
SYN1P17600 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.02■□□□□ 0.32
SYN1P17600 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.02■□□□□ 0.32
SYN1P17600 COX6A1P2-201ENST00000620597 330 ntBASIC17.02■□□□□ 0.32
SYN1P17600 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.02■□□□□ 0.32
SYN1P17600 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYN1P17600 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYN1P17600 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.02■□□□□ 0.31
SYN1P17600 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYN1P17600 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYN1P17600 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYN1P17600 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SYN1P17600 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYN1P17600 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SYN1P17600 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYN1P17600 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYN1P17600 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SYN1P17600 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SYN1P17600 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SYN1P17600 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.01■□□□□ 0.31
SYN1P17600 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
SYN1P17600 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYN1P17600 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms