Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RPL37AP1-201ENST00000412502 279 ntBASIC16.64■□□□□ 0.25
PDGFRAP16234 AC092580.3-201ENST00000430932 139 ntBASIC16.64■□□□□ 0.25
PDGFRAP16234 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.64■□□□□ 0.25
PDGFRAP16234 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PDGFRAP16234 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.64■□□□□ 0.25
PDGFRAP16234 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.64■□□□□ 0.25
PDGFRAP16234 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.64■□□□□ 0.25
PDGFRAP16234 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.64■□□□□ 0.25
PDGFRAP16234 AC073592.8-201ENST00000624126 511 ntBASIC16.64■□□□□ 0.25
PDGFRAP16234 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PDGFRAP16234 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.64■□□□□ 0.25
PDGFRAP16234 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PDGFRAP16234 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
PDGFRAP16234 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDGFRAP16234 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PDGFRAP16234 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.63■□□□□ 0.25
PDGFRAP16234 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PDGFRAP16234 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.63■□□□□ 0.25
PDGFRAP16234 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PDGFRAP16234 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFRAP16234 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.63■□□□□ 0.25
PDGFRAP16234 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 AL080243.2-201ENST00000418783 582 ntBASIC16.63■□□□□ 0.25
PDGFRAP16234 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.63■□□□□ 0.25
PDGFRAP16234 HLA-V-204ENST00000476601 1289 ntBASIC16.63■□□□□ 0.25
PDGFRAP16234 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.63■□□□□ 0.25
PDGFRAP16234 HNRNPUP1-201ENST00000554987 333 ntBASIC16.63■□□□□ 0.25
PDGFRAP16234 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 AC097359.3-201ENST00000603982 1210 ntBASIC16.63■□□□□ 0.25
PDGFRAP16234 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.63■□□□□ 0.25
PDGFRAP16234 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PDGFRAP16234 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PDGFRAP16234 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.63■□□□□ 0.25
PDGFRAP16234 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFRAP16234 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.63■□□□□ 0.25
PDGFRAP16234 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFRAP16234 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFRAP16234 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFRAP16234 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFRAP16234 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PDGFRAP16234 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 BASP1P1-201ENST00000430708 665 ntBASIC16.62■□□□□ 0.25
PDGFRAP16234 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFRAP16234 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 AC027369.6-201ENST00000525520 931 ntBASIC16.62■□□□□ 0.25
PDGFRAP16234 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.62■□□□□ 0.25
PDGFRAP16234 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PDGFRAP16234 SPCS2P1-201ENST00000561636 679 ntBASIC16.62■□□□□ 0.25
PDGFRAP16234 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 AL138828.2-201ENST00000615812 383 ntBASIC16.62■□□□□ 0.25
PDGFRAP16234 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDGFRAP16234 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PDGFRAP16234 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFRAP16234 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PDGFRAP16234 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFRAP16234 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms