Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC26.41■■□□□ 1.82
CFTRP13569 RTN3P1-201ENST00000536295 711 ntBASIC26.41■■□□□ 1.82
CFTRP13569 PGAM1P5-201ENST00000548011 764 ntBASIC26.41■■□□□ 1.82
CFTRP13569 AC009779.1-201ENST00000551138 283 ntBASIC26.41■■□□□ 1.82
CFTRP13569 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC26.41■■□□□ 1.82
CFTRP13569 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CFTRP13569 SAMD11P1-201ENST00000571429 661 ntBASIC26.41■■□□□ 1.82
CFTRP13569 MIR4683-201ENST00000579659 81 ntBASIC26.41■■□□□ 1.82
CFTRP13569 AC012044.1-201ENST00000603431 297 ntBASIC26.41■■□□□ 1.82
CFTRP13569 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC26.41■■□□□ 1.82
CFTRP13569 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CFTRP13569 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC26.41■■□□□ 1.82
CFTRP13569 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC26.4■■□□□ 1.82
CFTRP13569 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CFTRP13569 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CFTRP13569 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC26.4■■□□□ 1.82
CFTRP13569 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CFTRP13569 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC26.4■■□□□ 1.82
CFTRP13569 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CFTRP13569 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CFTRP13569 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC26.4■■□□□ 1.82
CFTRP13569 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
CFTRP13569 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CFTRP13569 PUDPP3-201ENST00000445368 636 ntBASIC26.4■■□□□ 1.82
CFTRP13569 AC073150.1-201ENST00000450406 1084 ntBASIC26.4■■□□□ 1.82
CFTRP13569 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC26.4■■□□□ 1.82
CFTRP13569 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC26.4■■□□□ 1.82
CFTRP13569 SNORD3B-2-202ENST00000571722 791 ntBASIC26.4■■□□□ 1.82
CFTRP13569 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CFTRP13569 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC26.4■■□□□ 1.82
CFTRP13569 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC26.39■■□□□ 1.82
CFTRP13569 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CFTRP13569 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CFTRP13569 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
CFTRP13569 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CFTRP13569 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC26.39■■□□□ 1.82
CFTRP13569 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
CFTRP13569 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CFTRP13569 VDAC1P1-201ENST00000439229 848 ntBASIC26.39■■□□□ 1.82
CFTRP13569 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC26.39■■□□□ 1.82
CFTRP13569 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC26.39■■□□□ 1.82
CFTRP13569 INO80C-210ENST00000590757 595 ntTSL 2 BASIC26.39■■□□□ 1.82
CFTRP13569 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CFTRP13569 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CFTRP13569 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC26.39■■□□□ 1.81
CFTRP13569 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC26.39■■□□□ 1.81
CFTRP13569 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CFTRP13569 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC26.38■■□□□ 1.81
CFTRP13569 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CFTRP13569 PFN2-202ENST00000423691 911 ntTSL 2 BASIC26.38■■□□□ 1.81
CFTRP13569 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC26.38■■□□□ 1.81
CFTRP13569 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC26.38■■□□□ 1.81
CFTRP13569 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC26.38■■□□□ 1.81
CFTRP13569 AC135983.4-201ENST00000564116 1262 ntBASIC26.38■■□□□ 1.81
CFTRP13569 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC26.38■■□□□ 1.81
CFTRP13569 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC26.38■■□□□ 1.81
CFTRP13569 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC26.38■■□□□ 1.81
CFTRP13569 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC26.38■■□□□ 1.81
CFTRP13569 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CFTRP13569 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CFTRP13569 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CFTRP13569 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CFTRP13569 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CFTRP13569 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CFTRP13569 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC26.38■■□□□ 1.81
CFTRP13569 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC26.38■■□□□ 1.81
CFTRP13569 AC055811.4-201ENST00000624039 1754 ntBASIC26.38■■□□□ 1.81
CFTRP13569 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC26.38■■□□□ 1.81
CFTRP13569 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC26.37■■□□□ 1.81
CFTRP13569 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CFTRP13569 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CFTRP13569 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CFTRP13569 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC26.37■■□□□ 1.81
CFTRP13569 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CFTRP13569 HNRNPA1P36-201ENST00000521313 955 ntBASIC26.37■■□□□ 1.81
CFTRP13569 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC26.37■■□□□ 1.81
CFTRP13569 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CFTRP13569 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC26.37■■□□□ 1.81
CFTRP13569 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC26.37■■□□□ 1.81
CFTRP13569 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC26.37■■□□□ 1.81
CFTRP13569 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC26.37■■□□□ 1.81
CFTRP13569 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC26.37■■□□□ 1.81
CFTRP13569 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CFTRP13569 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC26.37■■□□□ 1.81
CFTRP13569 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC26.37■■□□□ 1.81
CFTRP13569 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CFTRP13569 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CFTRP13569 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CFTRP13569 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC26.36■■□□□ 1.81
CFTRP13569 HLA-J-204ENST00000495278 958 ntBASIC26.36■■□□□ 1.81
CFTRP13569 CTBP2P4-201ENST00000513884 920 ntBASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms