Protein–RNA interactions for Protein: P0DP09

IGKV1-13, Immunoglobulin kappa variable 1-13, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-13P0DP09 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 AC068587.6-202ENST00000641839 5619 ntBASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 AC126365.1-201ENST00000578585 1514 ntBASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 AC023908.3-201ENST00000564211 3047 ntBASIC13.13□□□□□ -0.31
IGKV1-13P0DP09 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 AC009078.2-202ENST00000463353 338 ntBASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 RARRES2P8-201ENST00000566335 367 ntBASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 SNX18-202ENST00000343017 3140 ntBASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 LINC01101-201ENST00000622953 1884 ntBASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGKV1-13P0DP09 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 PKD1P5-201ENST00000532415 10291 ntBASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AC004987.2-201ENST00000395959 1148 ntBASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 RPS8P6-201ENST00000426177 609 ntBASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AL662844.1-201ENST00000546340 181 ntBASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
IGKV1-13P0DP09 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms