Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.97□□□□□ -0.17
UBCP0CG48 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.97□□□□□ -0.17
UBCP0CG48 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.97□□□□□ -0.17
UBCP0CG48 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 AC097376.2-205ENST00000610159 5334 ntBASIC13.97□□□□□ -0.17
UBCP0CG48 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.97□□□□□ -0.17
UBCP0CG48 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.97□□□□□ -0.17
UBCP0CG48 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
UBCP0CG48 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 AC112191.1-201ENST00000523689 701 ntBASIC13.97□□□□□ -0.17
UBCP0CG48 AC105233.2-201ENST00000523697 349 ntBASIC13.97□□□□□ -0.17
UBCP0CG48 AF228730.5-201ENST00000530288 346 ntBASIC13.97□□□□□ -0.17
UBCP0CG48 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.97□□□□□ -0.17
UBCP0CG48 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.97□□□□□ -0.17
UBCP0CG48 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.97□□□□□ -0.17
UBCP0CG48 AC073389.1-201ENST00000595595 795 ntBASIC13.97□□□□□ -0.17
UBCP0CG48 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBCP0CG48 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBCP0CG48 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.96□□□□□ -0.17
UBCP0CG48 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UBCP0CG48 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
UBCP0CG48 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.96□□□□□ -0.17
UBCP0CG48 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.96□□□□□ -0.17
UBCP0CG48 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.96□□□□□ -0.17
UBCP0CG48 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
UBCP0CG48 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
UBCP0CG48 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.96□□□□□ -0.17
UBCP0CG48 PDPK2P-202ENST00000562415 1191 ntBASIC13.96□□□□□ -0.17
UBCP0CG48 AC145285.3-201ENST00000564603 959 ntBASIC13.96□□□□□ -0.17
UBCP0CG48 AC018845.2-201ENST00000568326 409 ntBASIC13.96□□□□□ -0.17
UBCP0CG48 SLC25A6P4-201ENST00000586535 553 ntBASIC13.96□□□□□ -0.17
UBCP0CG48 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.96□□□□□ -0.17
UBCP0CG48 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
UBCP0CG48 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.96□□□□□ -0.17
UBCP0CG48 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBCP0CG48 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms