Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HOXC6P09630 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC6P09630 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC6P09630 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC6P09630 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
HOXC6P09630 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC6P09630 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HOXC6P09630 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.74■□□□□ 0.43
HOXC6P09630 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC6P09630 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.74■□□□□ 0.43
HOXC6P09630 AL591846.1-201ENST00000451736 433 ntBASIC17.74■□□□□ 0.43
HOXC6P09630 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.74■□□□□ 0.43
HOXC6P09630 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.74■□□□□ 0.43
HOXC6P09630 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC6P09630 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.74■□□□□ 0.43
HOXC6P09630 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.74■□□□□ 0.43
HOXC6P09630 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HOXC6P09630 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HOXC6P09630 AHCYP2-201ENST00000430630 1300 ntBASIC17.73■□□□□ 0.43
HOXC6P09630 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC6P09630 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC6P09630 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
HOXC6P09630 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HOXC6P09630 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HOXC6P09630 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC6P09630 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.73■□□□□ 0.43
HOXC6P09630 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 CD8B2-202ENST00000417670 633 ntBASIC17.73■□□□□ 0.43
HOXC6P09630 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HOXC6P09630 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.73■□□□□ 0.43
HOXC6P09630 KRT18P25-201ENST00000508931 1278 ntBASIC17.73■□□□□ 0.43
HOXC6P09630 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC6P09630 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.73■□□□□ 0.43
HOXC6P09630 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.73■□□□□ 0.43
HOXC6P09630 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.73■□□□□ 0.43
HOXC6P09630 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HOXC6P09630 AC145423.3-201ENST00000615987 467 ntBASIC17.73■□□□□ 0.43
HOXC6P09630 AC138951.2-201ENST00000623455 1161 ntBASIC17.73■□□□□ 0.43
HOXC6P09630 AL008638.5-201ENST00000623814 1298 ntBASIC17.73■□□□□ 0.43
HOXC6P09630 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HOXC6P09630 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXC6P09630 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.73■□□□□ 0.43
HOXC6P09630 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXC6P09630 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HOXC6P09630 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC6P09630 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
HOXC6P09630 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXC6P09630 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXC6P09630 AC104306.2-201ENST00000451877 341 ntBASIC17.72■□□□□ 0.43
HOXC6P09630 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXC6P09630 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HOXC6P09630 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms