Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
VTNP04004 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.29■□□□□ 0.36
VTNP04004 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 TDH-203ENST00000531764 1110 ntBASIC17.29■□□□□ 0.36
VTNP04004 SNX29P1-201ENST00000548357 1007 ntBASIC17.29■□□□□ 0.36
VTNP04004 AC120045.2-201ENST00000567334 178 ntBASIC17.29■□□□□ 0.36
VTNP04004 MIR6805-201ENST00000615055 62 ntBASIC17.29■□□□□ 0.36
VTNP04004 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VTNP04004 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.29■□□□□ 0.36
VTNP04004 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.29■□□□□ 0.36
VTNP04004 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.29■□□□□ 0.36
VTNP04004 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VTNP04004 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.28■□□□□ 0.36
VTNP04004 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VTNP04004 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 C1QBPP1-201ENST00000400117 770 ntBASIC17.28■□□□□ 0.36
VTNP04004 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.28■□□□□ 0.36
VTNP04004 SOCS2P1-201ENST00000417727 557 ntBASIC17.28■□□□□ 0.36
VTNP04004 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 RPL13AP25-201ENST00000484130 612 ntBASIC17.28■□□□□ 0.36
VTNP04004 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.28■□□□□ 0.36
VTNP04004 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.28■□□□□ 0.36
VTNP04004 BTNL10-201ENST00000595971 695 ntBASIC17.28■□□□□ 0.36
VTNP04004 AC000095.1-201ENST00000603208 874 ntBASIC17.28■□□□□ 0.36
VTNP04004 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.28■□□□□ 0.36
VTNP04004 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.28■□□□□ 0.36
VTNP04004 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VTNP04004 AC018665.1-201ENST00000622927 1362 ntBASIC17.28■□□□□ 0.36
VTNP04004 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
VTNP04004 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.27■□□□□ 0.36
VTNP04004 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.27■□□□□ 0.36
VTNP04004 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.27■□□□□ 0.36
VTNP04004 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.27■□□□□ 0.36
VTNP04004 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
VTNP04004 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.27■□□□□ 0.36
VTNP04004 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.27■□□□□ 0.36
VTNP04004 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.27■□□□□ 0.36
VTNP04004 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 SLC25A47P1-201ENST00000531577 414 ntBASIC17.27■□□□□ 0.36
VTNP04004 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VTNP04004 MIR4259-201ENST00000584466 101 ntBASIC17.27■□□□□ 0.36
VTNP04004 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.27■□□□□ 0.36
VTNP04004 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
VTNP04004 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.27■□□□□ 0.36
VTNP04004 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VTNP04004 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
VTNP04004 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
VTNP04004 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.27■□□□□ 0.35
VTNP04004 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VTNP04004 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.27■□□□□ 0.35
VTNP04004 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VTNP04004 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.27■□□□□ 0.35
VTNP04004 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VTNP04004 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.27■□□□□ 0.35
VTNP04004 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VTNP04004 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
VTNP04004 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VTNP04004 PCDHB19P-201ENST00000570871 2371 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms