Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
KRT6AP02538 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.42■□□□□ 0.06
KRT6AP02538 LINC01225-203ENST00000563550 1244 ntBASIC15.42■□□□□ 0.06
KRT6AP02538 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 MTDHP5-201ENST00000598980 586 ntBASIC15.42■□□□□ 0.06
KRT6AP02538 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
KRT6AP02538 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
KRT6AP02538 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.42■□□□□ 0.06
KRT6AP02538 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.42■□□□□ 0.06
KRT6AP02538 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.41■□□□□ 0.06
KRT6AP02538 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT6AP02538 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT6AP02538 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT6AP02538 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
KRT6AP02538 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
KRT6AP02538 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 AC105250.1-201ENST00000509378 2057 ntBASIC15.41■□□□□ 0.06
KRT6AP02538 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
KRT6AP02538 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.41■□□□□ 0.06
KRT6AP02538 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT6AP02538 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.41■□□□□ 0.06
KRT6AP02538 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT6AP02538 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.41■□□□□ 0.06
KRT6AP02538 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT6AP02538 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
KRT6AP02538 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.41■□□□□ 0.06
KRT6AP02538 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.41■□□□□ 0.06
KRT6AP02538 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.41■□□□□ 0.06
KRT6AP02538 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
KRT6AP02538 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms