Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.65■□□□□ 0.26
OPHN1O60890 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.65■□□□□ 0.26
OPHN1O60890 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
OPHN1O60890 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.65■□□□□ 0.26
OPHN1O60890 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OPHN1O60890 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.65■□□□□ 0.26
OPHN1O60890 AL589702.1-201ENST00000641229 1509 ntBASIC16.65■□□□□ 0.26
OPHN1O60890 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
OPHN1O60890 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.64■□□□□ 0.25
OPHN1O60890 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.64■□□□□ 0.25
OPHN1O60890 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 SPDYE14P-201ENST00000442619 822 ntBASIC16.64■□□□□ 0.25
OPHN1O60890 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.64■□□□□ 0.25
OPHN1O60890 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.64■□□□□ 0.25
OPHN1O60890 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.64■□□□□ 0.25
OPHN1O60890 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.64■□□□□ 0.25
OPHN1O60890 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.64■□□□□ 0.25
OPHN1O60890 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.64■□□□□ 0.25
OPHN1O60890 AL008721.1-201ENST00000609964 604 ntBASIC16.64■□□□□ 0.25
OPHN1O60890 MIR6080-201ENST00000617359 66 ntBASIC16.64■□□□□ 0.25
OPHN1O60890 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
OPHN1O60890 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.64■□□□□ 0.25
OPHN1O60890 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
OPHN1O60890 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
OPHN1O60890 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.63■□□□□ 0.25
OPHN1O60890 CRB3P1-201ENST00000449338 276 ntBASIC16.63■□□□□ 0.25
OPHN1O60890 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.63■□□□□ 0.25
OPHN1O60890 AP005018.1-201ENST00000525475 301 ntBASIC16.63■□□□□ 0.25
OPHN1O60890 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.63■□□□□ 0.25
OPHN1O60890 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
OPHN1O60890 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
OPHN1O60890 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPHN1O60890 AP005117.1-202ENST00000581724 1908 ntBASIC16.62■□□□□ 0.25
OPHN1O60890 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPHN1O60890 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
OPHN1O60890 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
OPHN1O60890 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
OPHN1O60890 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms