Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 MSTO2P-201ENST00000314835 1709 ntBASIC19.59■□□□□ 0.73
CACNA1FO60840 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA1FO60840 MROH4P-201ENST00000431302 1578 ntBASIC19.59■□□□□ 0.73
CACNA1FO60840 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA1FO60840 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA1FO60840 MIR1909-201ENST00000411312 80 ntBASIC19.59■□□□□ 0.73
CACNA1FO60840 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1FO60840 AL022328.1-201ENST00000610050 478 ntBASIC19.59■□□□□ 0.73
CACNA1FO60840 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA1FO60840 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1FO60840 C18orf15-201ENST00000623680 2534 ntBASIC19.58■□□□□ 0.73
CACNA1FO60840 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1FO60840 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1FO60840 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.58■□□□□ 0.73
CACNA1FO60840 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1FO60840 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.58■□□□□ 0.73
CACNA1FO60840 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1FO60840 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1FO60840 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.58■□□□□ 0.73
CACNA1FO60840 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CACNA1FO60840 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1FO60840 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CACNA1FO60840 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1FO60840 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.58■□□□□ 0.73
CACNA1FO60840 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CACNA1FO60840 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CACNA1FO60840 ACTG1P3-201ENST00000431775 1114 ntBASIC19.58■□□□□ 0.73
CACNA1FO60840 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.58■□□□□ 0.73
CACNA1FO60840 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CACNA1FO60840 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.58■□□□□ 0.73
CACNA1FO60840 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CACNA1FO60840 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1FO60840 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1FO60840 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1FO60840 AC007787.1-201ENST00000588095 1583 ntBASIC19.58■□□□□ 0.72
CACNA1FO60840 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1FO60840 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.57■□□□□ 0.72
CACNA1FO60840 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CACNA1FO60840 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.57■□□□□ 0.72
CACNA1FO60840 ARSEP1-201ENST00000420443 635 ntBASIC19.57■□□□□ 0.72
CACNA1FO60840 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1FO60840 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.57■□□□□ 0.72
CACNA1FO60840 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
CACNA1FO60840 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.57■□□□□ 0.72
CACNA1FO60840 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 PDIA3P1-201ENST00000471856 1510 ntBASIC19.57■□□□□ 0.72
CACNA1FO60840 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1FO60840 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.57■□□□□ 0.72
CACNA1FO60840 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1FO60840 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.57■□□□□ 0.72
CACNA1FO60840 KRT18P25-201ENST00000508931 1278 ntBASIC19.57■□□□□ 0.72
CACNA1FO60840 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.57■□□□□ 0.72
CACNA1FO60840 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.57■□□□□ 0.72
CACNA1FO60840 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1FO60840 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1FO60840 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.56■□□□□ 0.72
CACNA1FO60840 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.56■□□□□ 0.72
CACNA1FO60840 CNN2P8-201ENST00000421872 913 ntBASIC19.56■□□□□ 0.72
CACNA1FO60840 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.56■□□□□ 0.72
CACNA1FO60840 AC017083.2-201ENST00000608069 979 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms