Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.22□□□□□ -0.13
ZIC3O60481 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZIC3O60481 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
ZIC3O60481 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
ZIC3O60481 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZIC3O60481 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.21□□□□□ -0.13
ZIC3O60481 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 AC098850.1-201ENST00000419919 790 ntBASIC14.21□□□□□ -0.13
ZIC3O60481 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZIC3O60481 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.21□□□□□ -0.13
ZIC3O60481 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.21□□□□□ -0.13
ZIC3O60481 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
ZIC3O60481 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 AC025048.6-201ENST00000634326 1161 ntBASIC14.21□□□□□ -0.13
ZIC3O60481 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ZIC3O60481 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.21□□□□□ -0.13
ZIC3O60481 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZIC3O60481 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
ZIC3O60481 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.21□□□□□ -0.14
ZIC3O60481 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZIC3O60481 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZIC3O60481 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZIC3O60481 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.21□□□□□ -0.14
ZIC3O60481 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
ZIC3O60481 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 AC022188.1-201ENST00000620960 1664 ntBASIC14.2□□□□□ -0.14
ZIC3O60481 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.2□□□□□ -0.14
ZIC3O60481 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ZIC3O60481 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ZIC3O60481 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ZIC3O60481 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.2□□□□□ -0.14
ZIC3O60481 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 AP005018.1-201ENST00000525475 301 ntBASIC14.2□□□□□ -0.14
ZIC3O60481 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.2□□□□□ -0.14
ZIC3O60481 AC140912.1-201ENST00000577171 1054 ntBASIC14.2□□□□□ -0.14
ZIC3O60481 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.2□□□□□ -0.14
ZIC3O60481 AC027307.3-201ENST00000594262 1100 ntBASIC14.2□□□□□ -0.14
ZIC3O60481 AC093726.1-201ENST00000608064 963 ntBASIC14.2□□□□□ -0.14
ZIC3O60481 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.2□□□□□ -0.14
ZIC3O60481 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ZIC3O60481 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 AC105233.6-201ENST00000642093 218 ntBASIC14.2□□□□□ -0.14
ZIC3O60481 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZIC3O60481 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.2□□□□□ -0.14
ZIC3O60481 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.2□□□□□ -0.14
ZIC3O60481 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZIC3O60481 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZIC3O60481 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.19□□□□□ -0.14
ZIC3O60481 TNRC18P3-201ENST00000441896 2691 ntBASIC14.19□□□□□ -0.14
ZIC3O60481 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZIC3O60481 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.19□□□□□ -0.14
ZIC3O60481 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ZIC3O60481 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms