Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.56■□□□□ 0.08
PEX1O43933 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.56■□□□□ 0.08
PEX1O43933 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.56■□□□□ 0.08
PEX1O43933 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PEX1O43933 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.56■□□□□ 0.08
PEX1O43933 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 CEND1P1-201ENST00000451006 455 ntBASIC15.56■□□□□ 0.08
PEX1O43933 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.56■□□□□ 0.08
PEX1O43933 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
PEX1O43933 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.56■□□□□ 0.08
PEX1O43933 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 AL596442.2-201ENST00000610240 980 ntBASIC15.56■□□□□ 0.08
PEX1O43933 ACTL9-202ENST00000612068 1252 ntBASIC15.56■□□□□ 0.08
PEX1O43933 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.56■□□□□ 0.08
PEX1O43933 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.56■□□□□ 0.08
PEX1O43933 LINC01144-201ENST00000626198 1710 ntBASIC15.56■□□□□ 0.08
PEX1O43933 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.56■□□□□ 0.08
PEX1O43933 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.56■□□□□ 0.08
PEX1O43933 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PEX1O43933 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.55■□□□□ 0.08
PEX1O43933 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
PEX1O43933 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.55■□□□□ 0.08
PEX1O43933 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
PEX1O43933 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.55■□□□□ 0.08
PEX1O43933 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.55■□□□□ 0.08
PEX1O43933 FAM58CP-201ENST00000435741 640 ntBASIC15.55■□□□□ 0.08
PEX1O43933 AP006288.1-201ENST00000446065 395 ntBASIC15.55■□□□□ 0.08
PEX1O43933 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PEX1O43933 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PEX1O43933 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PEX1O43933 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
PEX1O43933 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 AL390755.1-201ENST00000623716 2027 ntBASIC15.55■□□□□ 0.08
PEX1O43933 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
PEX1O43933 ELL2P1-201ENST00000413990 1906 ntBASIC15.55■□□□□ 0.08
PEX1O43933 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PEX1O43933 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PEX1O43933 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms