Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC28A2O43868 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC28A2O43868 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SLC28A2O43868 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC28A2O43868 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC28A2O43868 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SLC28A2O43868 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC28A2O43868 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC28A2O43868 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SLC28A2O43868 REXO1L6P-201ENST00000603433 1515 ntBASIC15.35■□□□□ 0.05
SLC28A2O43868 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 RNU1-129P-201ENST00000384064 167 ntBASIC15.35■□□□□ 0.05
SLC28A2O43868 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 DGCR5-201ENST00000399539 862 ntBASIC15.35■□□□□ 0.05
SLC28A2O43868 HMGA1P7-201ENST00000406908 502 ntBASIC15.35■□□□□ 0.05
SLC28A2O43868 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.35■□□□□ 0.05
SLC28A2O43868 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC28A2O43868 AC106886.1-201ENST00000568660 600 ntBASIC15.35■□□□□ 0.05
SLC28A2O43868 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.35■□□□□ 0.05
SLC28A2O43868 U1.21-201ENST00000580816 167 ntBASIC15.35■□□□□ 0.05
SLC28A2O43868 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC28A2O43868 AC021097.1-201ENST00000607902 574 ntBASIC15.35■□□□□ 0.05
SLC28A2O43868 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC28A2O43868 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC28A2O43868 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SLC28A2O43868 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC28A2O43868 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SLC28A2O43868 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.34■□□□□ 0.05
SLC28A2O43868 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 BCYRN1-201ENST00000418539 200 ntBASIC15.34■□□□□ 0.05
SLC28A2O43868 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC28A2O43868 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC28A2O43868 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 SPTSSB-204ENST00000617024 1292 ntBASIC15.34■□□□□ 0.05
SLC28A2O43868 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 HYMAI-201ENST00000635591 3347 ntBASIC15.34■□□□□ 0.05
SLC28A2O43868 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SLC28A2O43868 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC28A2O43868 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC28A2O43868 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC28A2O43868 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.34■□□□□ 0.05
SLC28A2O43868 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms