Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.14□□□□□ -0.15
TRAF3IP2O43734 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAF3IP2O43734 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AC020658.6-201ENST00000623564 1870 ntBASIC14.13□□□□□ -0.15
TRAF3IP2O43734 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 SERBP1P3-201ENST00000459980 809 ntBASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AC069120.2-201ENST00000524091 540 ntBASIC14.13□□□□□ -0.15
TRAF3IP2O43734 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AL607033.1-201ENST00000623900 1599 ntBASIC14.13□□□□□ -0.15
TRAF3IP2O43734 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAF3IP2O43734 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 AL033527.5-202ENST00000641632 1098 ntBASIC14.12□□□□□ -0.15
TRAF3IP2O43734 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAF3IP2O43734 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms