Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.79■□□□□ 0.44
ACTN4O43707 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ACTN4O43707 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.79■□□□□ 0.44
ACTN4O43707 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ACTN4O43707 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
ACTN4O43707 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ACTN4O43707 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.78■□□□□ 0.44
ACTN4O43707 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.78■□□□□ 0.44
ACTN4O43707 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.78■□□□□ 0.44
ACTN4O43707 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ACTN4O43707 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
ACTN4O43707 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.78■□□□□ 0.44
ACTN4O43707 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.78■□□□□ 0.44
ACTN4O43707 AL133215.2-201ENST00000609242 977 ntBASIC17.78■□□□□ 0.44
ACTN4O43707 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.78■□□□□ 0.44
ACTN4O43707 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ACTN4O43707 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
ACTN4O43707 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ACTN4O43707 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ACTN4O43707 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.77■□□□□ 0.44
ACTN4O43707 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.77■□□□□ 0.44
ACTN4O43707 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.77■□□□□ 0.44
ACTN4O43707 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.77■□□□□ 0.44
ACTN4O43707 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.77■□□□□ 0.44
ACTN4O43707 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.77■□□□□ 0.44
ACTN4O43707 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ACTN4O43707 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
ACTN4O43707 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.77■□□□□ 0.44
ACTN4O43707 SPDYE17-201ENST00000412399 783 ntBASIC17.77■□□□□ 0.44
ACTN4O43707 AL353705.2-201ENST00000428243 662 ntBASIC17.77■□□□□ 0.44
ACTN4O43707 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.77■□□□□ 0.44
ACTN4O43707 AC112482.1-201ENST00000492080 688 ntBASIC17.77■□□□□ 0.44
ACTN4O43707 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.77■□□□□ 0.44
ACTN4O43707 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.77■□□□□ 0.44
ACTN4O43707 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.77■□□□□ 0.44
ACTN4O43707 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.77■□□□□ 0.44
ACTN4O43707 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.77■□□□□ 0.44
ACTN4O43707 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.77■□□□□ 0.44
ACTN4O43707 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ACTN4O43707 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.77■□□□□ 0.43
ACTN4O43707 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.77■□□□□ 0.43
ACTN4O43707 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ACTN4O43707 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
ACTN4O43707 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.77■□□□□ 0.43
ACTN4O43707 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ACTN4O43707 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
ACTN4O43707 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.77■□□□□ 0.43
ACTN4O43707 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
ACTN4O43707 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ACTN4O43707 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
ACTN4O43707 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ACTN4O43707 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ACTN4O43707 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
ACTN4O43707 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.76■□□□□ 0.43
ACTN4O43707 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ACTN4O43707 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.76■□□□□ 0.43
ACTN4O43707 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms