Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
MSH5O43196 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MSH5O43196 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MSH5O43196 AC087641.1-201ENST00000557561 1021 ntBASIC22.25■■□□□ 1.15
MSH5O43196 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MSH5O43196 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.25■■□□□ 1.15
MSH5O43196 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSH5O43196 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSH5O43196 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
MSH5O43196 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
MSH5O43196 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MSH5O43196 PI4KAP1-204ENST00000612579 1703 ntBASIC22.25■■□□□ 1.15
MSH5O43196 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC22.25■■□□□ 1.15
MSH5O43196 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSH5O43196 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSH5O43196 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
MSH5O43196 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
MSH5O43196 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
MSH5O43196 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
MSH5O43196 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
MSH5O43196 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC22.24■■□□□ 1.15
MSH5O43196 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC22.24■■□□□ 1.15
MSH5O43196 AC005237.2-201ENST00000434368 219 ntBASIC22.24■■□□□ 1.15
MSH5O43196 TSPY16P-201ENST00000449843 468 ntBASIC22.24■■□□□ 1.15
MSH5O43196 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.24■■□□□ 1.15
MSH5O43196 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC22.24■■□□□ 1.15
MSH5O43196 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC22.24■■□□□ 1.15
MSH5O43196 AP004833.1-201ENST00000507987 1238 ntBASIC22.24■■□□□ 1.15
MSH5O43196 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.24■■□□□ 1.15
MSH5O43196 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.24■■□□□ 1.15
MSH5O43196 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
MSH5O43196 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.24■■□□□ 1.15
MSH5O43196 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC22.24■■□□□ 1.15
MSH5O43196 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.24■■□□□ 1.15
MSH5O43196 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC22.24■■□□□ 1.15
MSH5O43196 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.24■■□□□ 1.15
MSH5O43196 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC22.24■■□□□ 1.15
MSH5O43196 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.24■■□□□ 1.15
MSH5O43196 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC22.24■■□□□ 1.15
MSH5O43196 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 BID-213ENST00000615414 2236 ntTSL 5 BASIC22.24■■□□□ 1.15
MSH5O43196 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 GTF2B-201ENST00000370500 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 AC092171.3-201ENST00000610122 2651 ntBASIC22.24■■□□□ 1.15
MSH5O43196 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MSH5O43196 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
MSH5O43196 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 AC002472.2-201ENST00000442739 958 ntBASIC22.23■■□□□ 1.15
MSH5O43196 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC22.23■■□□□ 1.15
MSH5O43196 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
MSH5O43196 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.23■■□□□ 1.15
MSH5O43196 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 OR52A4P-202ENST00000481634 799 ntBASIC22.23■■□□□ 1.15
MSH5O43196 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 AC080079.1-201ENST00000509326 1045 ntBASIC22.23■■□□□ 1.15
MSH5O43196 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 OR5H7P-201ENST00000514084 930 ntBASIC22.23■■□□□ 1.15
MSH5O43196 AP005639.2-201ENST00000527592 928 ntBASIC22.23■■□□□ 1.15
MSH5O43196 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 LRRC34P1-201ENST00000542742 915 ntBASIC22.23■■□□□ 1.15
MSH5O43196 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 AL121895.2-201ENST00000619558 447 ntBASIC22.23■■□□□ 1.15
MSH5O43196 AC022140.2-201ENST00000623500 188 ntBASIC22.23■■□□□ 1.15
MSH5O43196 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.23■■□□□ 1.15
MSH5O43196 AC022188.1-201ENST00000620960 1664 ntBASIC22.23■■□□□ 1.15
MSH5O43196 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
MSH5O43196 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MSH5O43196 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC22.22■■□□□ 1.15
MSH5O43196 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
MSH5O43196 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
MSH5O43196 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.22■■□□□ 1.15
MSH5O43196 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms