Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCC4O15439 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ABCC4O15439 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ABCC4O15439 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCC4O15439 AC046158.3-201ENST00000624947 2558 ntBASIC20.03■□□□□ 0.8
ABCC4O15439 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ABCC4O15439 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCC4O15439 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCC4O15439 AC022210.1-201ENST00000449856 793 ntBASIC20.02■□□□□ 0.8
ABCC4O15439 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCC4O15439 SLED1-202ENST00000512051 380 ntBASIC20.02■□□□□ 0.8
ABCC4O15439 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.02■□□□□ 0.8
ABCC4O15439 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.02■□□□□ 0.8
ABCC4O15439 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.02■□□□□ 0.8
ABCC4O15439 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCC4O15439 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCC4O15439 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCC4O15439 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCC4O15439 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ABCC4O15439 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ABCC4O15439 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCC4O15439 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
ABCC4O15439 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ABCC4O15439 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCC4O15439 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ABCC4O15439 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
ABCC4O15439 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ABCC4O15439 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ABCC4O15439 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.02■□□□□ 0.79
ABCC4O15439 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ABCC4O15439 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.02■□□□□ 0.79
ABCC4O15439 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.02■□□□□ 0.79
ABCC4O15439 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.02■□□□□ 0.79
ABCC4O15439 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.02■□□□□ 0.79
ABCC4O15439 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.02■□□□□ 0.79
ABCC4O15439 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.02■□□□□ 0.79
ABCC4O15439 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCC4O15439 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
ABCC4O15439 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCC4O15439 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCC4O15439 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ABCC4O15439 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ABCC4O15439 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCC4O15439 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCC4O15439 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.01■□□□□ 0.79
ABCC4O15439 AC022494.1-201ENST00000466044 728 ntBASIC20.01■□□□□ 0.79
ABCC4O15439 AC119751.2-201ENST00000504529 210 ntBASIC20.01■□□□□ 0.79
ABCC4O15439 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.01■□□□□ 0.79
ABCC4O15439 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.01■□□□□ 0.79
ABCC4O15439 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ABCC4O15439 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.01■□□□□ 0.79
ABCC4O15439 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCC4O15439 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20■□□□□ 0.79
ABCC4O15439 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20■□□□□ 0.79
ABCC4O15439 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20■□□□□ 0.79
ABCC4O15439 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20■□□□□ 0.79
ABCC4O15439 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ABCC4O15439 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20■□□□□ 0.79
ABCC4O15439 USP40-206ENST00000443711 628 ntTSL 2 BASIC20■□□□□ 0.79
ABCC4O15439 MIR4259-201ENST00000584466 101 ntBASIC20■□□□□ 0.79
ABCC4O15439 AL512343.1-201ENST00000605837 169 ntBASIC20■□□□□ 0.79
ABCC4O15439 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20■□□□□ 0.79
ABCC4O15439 MIR6799-201ENST00000620297 69 ntBASIC20■□□□□ 0.79
ABCC4O15439 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ABCC4O15439 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ABCC4O15439 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ABCC4O15439 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ABCC4O15439 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCC4O15439 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ABCC4O15439 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
ABCC4O15439 SSR4P1-203ENST00000599569 2260 ntBASIC19.99■□□□□ 0.79
ABCC4O15439 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCC4O15439 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCC4O15439 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCC4O15439 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ABCC4O15439 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.99■□□□□ 0.79
ABCC4O15439 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms