Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 MIR658-201ENST00000385210 100 ntBASIC18.94■□□□□ 0.62
SEMA3EO15041 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 SSR1P1-201ENST00000407630 814 ntBASIC18.94■□□□□ 0.62
SEMA3EO15041 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SEMA3EO15041 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 AP005482.1-201ENST00000563722 1273 ntBASIC18.94■□□□□ 0.62
SEMA3EO15041 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.94■□□□□ 0.62
SEMA3EO15041 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.94■□□□□ 0.62
SEMA3EO15041 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEMA3EO15041 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SEMA3EO15041 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SEMA3EO15041 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.93■□□□□ 0.62
SEMA3EO15041 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.93■□□□□ 0.62
SEMA3EO15041 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SEMA3EO15041 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 BAATP1-201ENST00000412284 1225 ntBASIC18.93■□□□□ 0.62
SEMA3EO15041 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SEMA3EO15041 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.93■□□□□ 0.62
SEMA3EO15041 AC012441.1-201ENST00000446669 685 ntBASIC18.93■□□□□ 0.62
SEMA3EO15041 AP001889.1-201ENST00000525414 633 ntBASIC18.93■□□□□ 0.62
SEMA3EO15041 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.93■□□□□ 0.62
SEMA3EO15041 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SEMA3EO15041 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SEMA3EO15041 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.93■□□□□ 0.62
SEMA3EO15041 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.93■□□□□ 0.62
SEMA3EO15041 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SEMA3EO15041 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEMA3EO15041 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SEMA3EO15041 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.92■□□□□ 0.62
SEMA3EO15041 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.92■□□□□ 0.62
SEMA3EO15041 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.92■□□□□ 0.62
SEMA3EO15041 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.92■□□□□ 0.62
SEMA3EO15041 AC093433.1-201ENST00000458048 571 ntBASIC18.92■□□□□ 0.62
SEMA3EO15041 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 AC119751.2-201ENST00000504529 210 ntBASIC18.92■□□□□ 0.62
SEMA3EO15041 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.92■□□□□ 0.62
SEMA3EO15041 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SEMA3EO15041 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.92■□□□□ 0.62
SEMA3EO15041 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SEMA3EO15041 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.92■□□□□ 0.62
SEMA3EO15041 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SEMA3EO15041 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.92■□□□□ 0.62
SEMA3EO15041 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEMA3EO15041 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SEMA3EO15041 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms