Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1O14646 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC24.85■■□□□ 1.57
CHD1O14646 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CHD1O14646 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1O14646 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1O14646 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1O14646 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD1O14646 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1O14646 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1O14646 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
CHD1O14646 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1O14646 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CHD1O14646 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD1O14646 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD1O14646 AP000358.1-201ENST00000456260 156 ntBASIC24.84■■□□□ 1.57
CHD1O14646 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1O14646 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD1O14646 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC24.84■■□□□ 1.57
CHD1O14646 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1O14646 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1O14646 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC24.84■■□□□ 1.57
CHD1O14646 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1O14646 AC078875.1-201ENST00000431907 724 ntBASIC24.83■■□□□ 1.57
CHD1O14646 PUDPP3-201ENST00000445368 636 ntBASIC24.83■■□□□ 1.57
CHD1O14646 LYPLA2P1-203ENST00000447689 696 ntBASIC24.83■■□□□ 1.57
CHD1O14646 ALG1L6P-201ENST00000515248 758 ntBASIC24.83■■□□□ 1.57
CHD1O14646 AC084781.1-201ENST00000613737 656 ntBASIC24.83■■□□□ 1.57
CHD1O14646 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC24.83■■□□□ 1.57
CHD1O14646 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1O14646 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1O14646 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC24.83■■□□□ 1.57
CHD1O14646 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC24.83■■□□□ 1.57
CHD1O14646 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1O14646 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1O14646 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC24.83■■□□□ 1.57
CHD1O14646 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC24.83■■□□□ 1.57
CHD1O14646 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC24.83■■□□□ 1.57
CHD1O14646 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1O14646 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
CHD1O14646 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1O14646 DDX39AP1-201ENST00000445147 1181 ntBASIC24.83■■□□□ 1.57
CHD1O14646 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CHD1O14646 AC027237.1-201ENST00000560942 655 ntBASIC24.83■■□□□ 1.57
CHD1O14646 DUX4L47-201ENST00000566374 394 ntBASIC24.83■■□□□ 1.57
CHD1O14646 AC008805.1-201ENST00000590892 364 ntBASIC24.83■■□□□ 1.57
CHD1O14646 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CHD1O14646 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHD1O14646 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC24.83■■□□□ 1.56
CHD1O14646 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHD1O14646 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC24.83■■□□□ 1.56
CHD1O14646 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC24.83■■□□□ 1.56
CHD1O14646 IL9RP3-201ENST00000442856 1674 ntBASIC24.82■■□□□ 1.56
CHD1O14646 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CHD1O14646 UBALD1-205ENST00000590891 2641 ntBASIC24.82■■□□□ 1.56
CHD1O14646 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHD1O14646 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHD1O14646 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD1O14646 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC24.82■■□□□ 1.56
CHD1O14646 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC24.82■■□□□ 1.56
CHD1O14646 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC24.82■■□□□ 1.56
CHD1O14646 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD1O14646 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC24.82■■□□□ 1.56
CHD1O14646 AC005041.3-201ENST00000606287 649 ntBASIC24.82■■□□□ 1.56
CHD1O14646 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD1O14646 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
CHD1O14646 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHD1O14646 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD1O14646 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHD1O14646 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
CHD1O14646 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC24.82■■□□□ 1.56
CHD1O14646 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHD1O14646 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC24.81■■□□□ 1.56
CHD1O14646 CD276-203ENST00000537340 2439 ntTSL 2 BASIC24.81■■□□□ 1.56
CHD1O14646 NHP2-202ENST00000314397 599 ntTSL 2 BASIC24.81■■□□□ 1.56
CHD1O14646 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHD1O14646 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC24.81■■□□□ 1.56
CHD1O14646 CHCHD2P9-201ENST00000461726 456 ntBASIC24.81■■□□□ 1.56
CHD1O14646 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC24.81■■□□□ 1.56
CHD1O14646 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CHD1O14646 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC24.81■■□□□ 1.56
CHD1O14646 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC24.81■■□□□ 1.56
CHD1O14646 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC24.81■■□□□ 1.56
CHD1O14646 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
CHD1O14646 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC24.81■■□□□ 1.56
CHD1O14646 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC24.81■■□□□ 1.56
CHD1O14646 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC24.81■■□□□ 1.56
CHD1O14646 AC244394.1-201ENST00000435000 1665 ntBASIC24.81■■□□□ 1.56
CHD1O14646 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHD1O14646 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHD1O14646 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHD1O14646 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHD1O14646 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC24.81■■□□□ 1.56
CHD1O14646 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
CHD1O14646 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CHD1O14646 HLA-K-203ENST00000430151 1046 ntBASIC24.81■■□□□ 1.56
CHD1O14646 KLF2P1-201ENST00000447438 1042 ntBASIC24.81■■□□□ 1.56
CHD1O14646 AC011247.3-201ENST00000603297 438 ntBASIC24.81■■□□□ 1.56
CHD1O14646 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC24.81■■□□□ 1.56
CHD1O14646 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CHD1O14646 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms