Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SOX1O00570 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.62■□□□□ 0.25
SOX1O00570 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 REXO1L1P-202ENST00000608646 1974 ntBASIC16.62■□□□□ 0.25
SOX1O00570 AL138799.1-201ENST00000448213 1675 ntBASIC16.62■□□□□ 0.25
SOX1O00570 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 AC004899.1-201ENST00000424687 1714 ntBASIC16.62■□□□□ 0.25
SOX1O00570 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SOX1O00570 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SOX1O00570 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX1O00570 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.61■□□□□ 0.25
SOX1O00570 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 AL391256.1-201ENST00000443260 1855 ntBASIC16.61■□□□□ 0.25
SOX1O00570 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.61■□□□□ 0.25
SOX1O00570 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX1O00570 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 MIR6858-201ENST00000620733 67 ntBASIC16.61■□□□□ 0.25
SOX1O00570 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX1O00570 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 LINC02012-201ENST00000608206 1725 ntBASIC16.61■□□□□ 0.25
SOX1O00570 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX1O00570 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX1O00570 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SOX1O00570 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SOX1O00570 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SOX1O00570 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SOX1O00570 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SOX1O00570 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX1O00570 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SOX1O00570 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX1O00570 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX1O00570 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SOX1O00570 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SOX1O00570 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX1O00570 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SOX1O00570 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX1O00570 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX1O00570 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX1O00570 AP003171.2-201ENST00000528208 925 ntBASIC16.6■□□□□ 0.25
SOX1O00570 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SOX1O00570 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX1O00570 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.6■□□□□ 0.25
SOX1O00570 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX1O00570 ENPP7P14-201ENST00000621765 1040 ntBASIC16.6■□□□□ 0.25
SOX1O00570 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX1O00570 AC068587.8-201ENST00000641239 219 ntBASIC16.6■□□□□ 0.25
SOX1O00570 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX1O00570 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.6■□□□□ 0.25
SOX1O00570 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX1O00570 AC092068.3-201ENST00000587894 2016 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms