Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PHKG1P2-201ENST00000457537 863 ntBASIC16.92■□□□□ 0.3
O00370 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.92■□□□□ 0.3
O00370 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.92■□□□□ 0.3
O00370 AC027369.6-201ENST00000525520 931 ntBASIC16.92■□□□□ 0.3
O00370 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.92■□□□□ 0.3
O00370 AL450472.2-201ENST00000603663 1156 ntBASIC16.92■□□□□ 0.3
O00370 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
O00370 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
O00370 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.92■□□□□ 0.3
O00370 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.92■□□□□ 0.3
O00370 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
O00370 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
O00370 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
O00370 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.92■□□□□ 0.3
O00370 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
O00370 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.91■□□□□ 0.3
O00370 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.91■□□□□ 0.3
O00370 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
O00370 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.91■□□□□ 0.3
O00370 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
O00370 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.91■□□□□ 0.3
O00370 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
O00370 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 AC055876.3-201ENST00000431496 288 ntBASIC16.91■□□□□ 0.3
O00370 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.91■□□□□ 0.3
O00370 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
O00370 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.91■□□□□ 0.3
O00370 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 AL512361.1-201ENST00000554200 418 ntBASIC16.91■□□□□ 0.3
O00370 HNRNPUP1-201ENST00000554987 333 ntBASIC16.91■□□□□ 0.3
O00370 AC027796.2-201ENST00000575326 344 ntBASIC16.91■□□□□ 0.3
O00370 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.91■□□□□ 0.3
O00370 AC138649.4-201ENST00000612222 287 ntBASIC16.91■□□□□ 0.3
O00370 AL033527.5-202ENST00000641632 1098 ntBASIC16.91■□□□□ 0.3
O00370 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.91■□□□□ 0.3
O00370 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
O00370 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.91■□□□□ 0.3
O00370 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.91■□□□□ 0.3
O00370 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.91■□□□□ 0.3
O00370 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
O00370 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
O00370 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
O00370 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
O00370 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 AC100757.3-201ENST00000622361 1406 ntBASIC16.9■□□□□ 0.3
O00370 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
O00370 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
O00370 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.9■□□□□ 0.3
O00370 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.9■□□□□ 0.3
O00370 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.9■□□□□ 0.3
O00370 SERBP1P3-201ENST00000459980 809 ntBASIC16.9■□□□□ 0.3
O00370 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.9■□□□□ 0.3
O00370 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.9■□□□□ 0.3
O00370 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
O00370 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms