Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
CCDC188H7C350 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC188H7C350 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC188H7C350 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC188H7C350 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC188H7C350 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC188H7C350 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC188H7C350 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC188H7C350 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC188H7C350 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC188H7C350 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC188H7C350 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC188H7C350 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC188H7C350 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC188H7C350 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC188H7C350 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC188H7C350 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CCDC188H7C350 AC073389.1-201ENST00000595595 795 ntBASIC16.52■□□□□ 0.24
CCDC188H7C350 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CCDC188H7C350 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC188H7C350 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC188H7C350 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC188H7C350 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC188H7C350 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC188H7C350 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CCDC188H7C350 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC188H7C350 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC188H7C350 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC188H7C350 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC188H7C350 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CCDC188H7C350 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC188H7C350 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CCDC188H7C350 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC188H7C350 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC188H7C350 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC188H7C350 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 AL450472.2-201ENST00000603663 1156 ntBASIC16.51■□□□□ 0.23
CCDC188H7C350 AL121912.1-201ENST00000603683 238 ntBASIC16.51■□□□□ 0.23
CCDC188H7C350 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC188H7C350 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC188H7C350 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC188H7C350 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC188H7C350 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC188H7C350 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC188H7C350 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC188H7C350 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC188H7C350 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC188H7C350 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC188H7C350 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC188H7C350 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC188H7C350 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC188H7C350 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC188H7C350 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC188H7C350 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC188H7C350 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC188H7C350 AJ011931.1-201ENST00000618749 2492 ntBASIC16.5■□□□□ 0.23
CCDC188H7C350 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms