Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC66A2RUB6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 LINC02447-202ENST00000501888 2146 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 MRPL20P1-201ENST00000400819 433 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 RNPS1P1-201ENST00000507437 918 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 UNC93B7-201ENST00000509439 705 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 AL356488.2-201ENST00000602755 427 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 IFNL4P1-201ENST00000607083 540 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 AL592424.1-201ENST00000563624 1536 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 AC005912.2-201ENST00000619492 2400 ntBASIC17.29■□□□□ 0.36
CCDC66A2RUB6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC66A2RUB6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 AC232323.1-201ENST00000540724 2099 ntBASIC17.28■□□□□ 0.36
CCDC66A2RUB6 REXO1L5P-201ENST00000622260 2098 ntBASIC17.28■□□□□ 0.36
CCDC66A2RUB6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 AC112504.1-201ENST00000623415 1841 ntBASIC17.28■□□□□ 0.36
CCDC66A2RUB6 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 AC105339.3-201ENST00000560043 636 ntBASIC17.28■□□□□ 0.36
CCDC66A2RUB6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC66A2RUB6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms