Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SHISA3A0PJX4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 AL691432.1-201ENST00000596308 1422 ntBASIC13.84□□□□□ -0.19
SHISA3A0PJX4 ACE3P-201ENST00000423435 1973 ntBASIC13.84□□□□□ -0.19
SHISA3A0PJX4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 AL645939.2-201ENST00000427340 991 ntBASIC13.84□□□□□ -0.19
SHISA3A0PJX4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 AL645728.2-201ENST00000641974 660 ntBASIC13.84□□□□□ -0.19
SHISA3A0PJX4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 AC010327.5-201ENST00000586923 3061 ntBASIC13.84□□□□□ -0.19
SHISA3A0PJX4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.84□□□□□ -0.19
SHISA3A0PJX4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
SHISA3A0PJX4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.83□□□□□ -0.19
SHISA3A0PJX4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.19
SHISA3A0PJX4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHISA3A0PJX4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SHISA3A0PJX4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
SHISA3A0PJX4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.19
SHISA3A0PJX4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHISA3A0PJX4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 AC109635.5-201ENST00000533593 962 ntBASIC13.83□□□□□ -0.2
SHISA3A0PJX4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHISA3A0PJX4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms