Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 HLA-H-201ENST00000383620 1096 ntBASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC142381.1-201ENST00000426099 345 ntBASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL158211.3-201ENST00000607385 239 ntBASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SPTSSB-204ENST00000617024 1292 ntBASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC126755.1-201ENST00000525846 6405 ntBASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AL353705.2-201ENST00000428243 662 ntBASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC097493.3-201ENST00000509725 367 ntBASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC027369.6-201ENST00000525520 931 ntBASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC073347.1-201ENST00000421633 2643 ntBASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC073439.1-201ENST00000624121 1774 ntBASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 TSPY16P-201ENST00000449843 468 ntBASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TCRBV4S1A1TA0A5B7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms