Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC079776.4-201ENST00000511039 504 ntBASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC007064.4-201ENST00000637740 555 ntBASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC092919.2-201ENST00000623631 1645 ntBASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 CICP13-201ENST00000422015 2789 ntBASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 HLA-A-201ENST00000376802 1334 ntBASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF103-CHMP3A0A140T963 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 TPM4P1-201ENST00000436100 807 ntBASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 KRT18P34-201ENST00000488218 1270 ntBASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF103-CHMP3A0A140T963 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC104109.2-201ENST00000602919 1418 ntBASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF103-CHMP3A0A140T963 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms