Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC187A0A096LP49 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 RNF216P1-203ENST00000404404 2427 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 NKILA-202ENST00000614771 2598 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 MSTO2P-201ENST00000314835 1709 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 AC026954.1-201ENST00000429771 1293 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 AC022137.2-201ENST00000503482 481 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 DUX4L45-201ENST00000566406 1057 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 RN7SL560P-201ENST00000577943 264 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 AC009542.2-202ENST00000619004 1067 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 AC008687.7-202ENST00000637404 953 ntBASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC187A0A096LP49 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 AC011676.5-201ENST00000624864 2660 ntBASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC187A0A096LP49 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 AC134407.2-201ENST00000625089 1978 ntBASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 RPL13AP20-201ENST00000459725 609 ntBASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 AC026410.3-201ENST00000514280 936 ntBASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 AC023310.1-201ENST00000554836 735 ntBASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC187A0A096LP49 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms