Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.06■□□□□ 0.16
RAI2Q9Y5P3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 AC004890.2-204ENST00000481968 304 ntBASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 MIR4313-201ENST00000580760 101 ntBASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
RAI2Q9Y5P3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AC007950.2-201ENST00000615045 2347 ntBASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 PIN1P1-201ENST00000412108 996 ntBASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AC136604.1-201ENST00000418535 575 ntBASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AC009477.1-201ENST00000452936 217 ntBASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AC097359.3-201ENST00000603982 1210 ntBASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAI2Q9Y5P3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAI2Q9Y5P3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms